dld (LOC100380662)


Basic Information

Item Value
gene id dld
gene name LOC100380662
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 26874466 ~ 26880268 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576290.2
CTGACTGGGATATCAGACACACGCATAGCTACATAGGGAGAATAACTGAGAAAGCCTTGGGGAAGTATTTTGGATCAGTACAACTTTTTCTCATTATCAAtcaaggggaaataaataaaacacaagCAACCCTAAAATTGGGTTGTCTCCTTTGCACCCTCAAATCAGAAGTTGTGTTGAACTGCATTATCTCATAACTGGATTGGAATTAACGCCTTGGCACGGAATTTCGAGTTTATTCCCACATTCTTCGTCGGGATTTTTTCGTCACCAGCACCACTGTTGAGGATTACATTGTACTGTAAACTTTGTTCATGAAGATACACTGAGAAGCATCGATATAAACTCCAGTTCCATTCAAAACGTCTGAAGACCTTCCGAATTTTTTAATTGGGACTTTTGATAACGGAAAATAGCTTTCTCGATGATTTTCTGAGCTGGGTCATACATAAATTGCCCTGGCTCGTGGACATTTAACTATTTATTGAATATTCTCACCACAATGGGACGCCAGTCGCTCGCGATAGCTGTCATCCTTTGTGTCTTGATATGCCAGGGTCTTGGTTCAGGCGTTTTCGAGTTGAAGTTACAAGAGTTTCTCAACAAGAAAGGAGTGACAGGCAATACAAACTGCTGCAAAGGAGCCTCTGGGATTCAGCAGTGTGAATGcaaaacgttttttagaatctGCTTGAAGCATTATCAAGTTAACGTAACACCGGAACCCCCTTGTACCTATGGCGGTGCGGTGACTCCTGTCCTCGGATCAAACTCCTTCCAAGTGCCTGAAACAACTGCAGAAGCATTCGCCAATCCTATTCCATTTTCTTTTGGATTCACGTGGCCGGGGACTTTCTCTCTGATCATTGAGGCCCTACACACAGATTCCGATGATGATCTTTCAACAGATAACCCTGAACGTCTGATCAGTCGTTTCACCACTCAGAGGCATCTGACAGTGGGAGATGAGTGGTCCTCTGATTTACAGACTGGTGGAAGAACAGAGCTGAAGTACTCCTACCGATTTGTTTGTGATGAGCATTACTACGGGGAGGGATGTTCTGTTTTCTGCCGTCCACGAGATGATGCCTTTGGTCACTTCACCTGTGGGGAACGTGGTGAGATCATCTGCAACTCAGGATGGAAGGGAACCTACTGCACAGAACCGATCTGTCTTCCTGGTTGTGGTGAGGAGCACGGGTTCTGTGACAAGCCTGGTGAATGCAAgtgTAGAGTTGGCTTCAGTGGGCGTTACTGTGATGACTGCATCCGCTACCCAGGATGTCTTCACGGCACCTGCCAGCAGCCATGGCAGTGTAACTGCCTGGAGGGATGGGGTGGCCTCTTCTGCAACCAAGATCTCAACTACTGCACACACCACAAGCCCTGCATGAATGGAGCCACTTGTACCAATACTGGCCAGGGTAGCTACACCTGCTCCTGTAAACCCGGCTTCTCTGGGGCCAGCTGTGGGATTGAGGTCAACAAATGTTCTGACAACCCCTGCCGGAATGGGGGAAGCTGCACTGATCAAGAAAACACCTACAAATGTACCTGCCCCCCTGGCTTCTATGGCAATAACTGTGAGCTCAGTGCCATGACCTGTGCCGATGGGCCTTGCTTTAATGGCGGACGCTGTGCTGACAACCCAGAGGGAGGATACTACTGCCAGTGTCCTCTTGGCTATGCCGGATTCAACTGTGAGAAGAAGATCGACCACTGCACCTCCGACCCATGTTCCAACGGTGCTCGGTGTATGGACCTTGTGAACTCCTACATGTGCCAGTGCCCTGAGGGCTTCTCCGGAGCCAACTGTGAGGACAACATTGACGAGTGCGCCAACTACCCCTGCCAGAACGGTGGCACATGCTCGGATGGCATGAACGATTACACCTGCACCTGCCCACCTGGATACACCGGCAAGAACTGCAGCTCGCCCATCAGCAAATGCGAGCACAATCCCTGCCACAACGGAGCCACCTGCCACGAGAGGAAGAACCGCTATGTGTGCGCCTGTGTGCCAGGTTACGGCGGCCATAACTGCCAGTTCCTCCTGCCAGCGCACCCCCAGGGACAGCCCGGGTTAGAGGGAGCTGATAAGAGATACTCTGATGACCAGGACCAAGGCACATTCCCCTGGACCGCGGTATGTGCTGGGATTATCCTggcgctgctgctgctggtggccTGTGCCTTGCTGGTAGTTTACATACGGGTCAAGGTGCAGCAGAGGAGTCAGCAGGGAGACAACCACAGTGAGAGTGAGACCATGAACAACCTGGCCAACAACTGTCAACGACCTGACAAGGACCTATCTGTCAGCGTGATCGGCACGACGGGGGtcaagaacaccaataagaaagTGGACTTTCACTCGGACAATGCTGGAGGAGAGCAGAATGGCTACAAGTCCCGATACTCGTCAACGGATTATAATCTGGTGCATGAGCTGAAGCCAGAAGATGTGTCGAAAGAGGACCAAGAAAAGAGCGAGGCAAAGTGTTCCGAATCAAATTGTTCCGAATCTCTGTGTTCGGACAGTGATTTCGAAGATAAACACAGAAAAAGTTTAAAGAGTGACGCCTCAGAAAAGAAACGTCCAGAGGAGTCGACATACAACGAAGCATCGATGTGCAATGACACAAAGTACCAGTCAGTCTACGTCATATCAGACGAGAAAGATGAATGTATCATTGCGACTGAGGTTTAACACCACAGCTGAGCTGTAGCTCGTCTTCTCTACAGGAGGTTTTACTCCGGTGAATGCTGCTCAAACCCAGGGGGAAGGTTTCCCTTCGTGTAACTGCTGCTGTGAGACTAAGACATTGAAAGTGATATTCAGAATGAGCTGGTTCTCAACTGAAGTAAGCACAGTGACTGCAGATAAAAAGGATGTTGGACCACACTGGCCCGCGCTCTCACAAGTTATGTTTCCCAGGAACGTGCGTAATATGGACTTGTTGCACTGCCTGTGAGGacagtttttttttacctcattgCACTATGGAGGGTTGCTTTTTAATATGTATTTAAACATACACATTTGAGTTAATAACTGTGTATAAGGAGTATGCACCGACTGCAGTGTGTATTTGTAAATCCTTTGAGCCAGTCTTCTGAATTGGTTTAGAGAGGGGAAACCACTACCTTCAAATTTGTTAAAATACTGTTGCTTTTTTTCTCAAAGATGTATTCTTTTAATTTAATTACATTGTGTTCCATTTGTTTGTGATTTTTGTAGAGTACATTTTGATATAATTTAAGTTCATTTTGTTTGTTTTGCAAATATGTATAATGTATATAAGGCACTTCAGGTCAATGTGACTTTGTTTTCCAACATAAATGTATTTAAGAAGCATTGTACAGAAGCTATTGGAAATGTTTTATCACTGTTGCCCATTAaggaaatcaactaaatattTTTCCAAAATAAATAATGTATGAAA

Function

NR:

description
delta-like protein D

GO:

id name namespace
GO:0021523 somatic motor neuron differentiation biological_process
GO:0007219 Notch signaling pathway biological_process
GO:0001756 somitogenesis biological_process
GO:0003140 determination of left/right asymmetry in lateral mesoderm biological_process
GO:0046331 lateral inhibition biological_process
GO:0048546 digestive tract morphogenesis biological_process
GO:0060218 hematopoietic stem cell differentiation biological_process
GO:0048471 perinuclear region of cytoplasm cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0030165 PDZ domain binding molecular_function

KEGG:

id description
K06051 DLL; delta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576290.2 True 3446 mRNA 0.47 11 26874466 26880268

Neighbor

gene id symbol gene type direction distance location
si:zfos-1056e6.1 LOC105021192 coding upstream 72341 26795174 ~ 26802125 (+)
LOC110498782 LOC105021192 coding upstream 89300 26783110 ~ 26785166 (+)
LOC110499259 LOC106589644 coding upstream 218355 26654584 ~ 26656111 (+)
LOC110499256 LOC106589642 coding upstream 235197 26632095 ~ 26639269 (+)
g6pc3 g6pc3 coding upstream 467052 26405112 ~ 26407414 (+)
LOC110499269 LOC106589654 coding downstream 89753 26970021 ~ 26972492 (+)
LOC110499270 LOC106589653 coding downstream 92882 26973150 ~ 26978647 (+)
LOC110499271 LOC106589655 coding downstream 125137 27005405 ~ 27012611 (+)
LOC110499272 rab4a coding downstream 182017 27062285 ~ 27068808 (+)
LOC110499274 urb2 coding downstream 219502 27099770 ~ 27132840 (+)
G1679227 NA non-coding upstream 17484 26856672 ~ 26856982 (+)
G1679226 NA non-coding upstream 18042 26855488 ~ 26856424 (+)
G1679190 ppm1g non-coding upstream 68075 26805002 ~ 26806391 (+)
G1679185 hltf non-coding upstream 95037 26778705 ~ 26779429 (+)
G1679112 NA non-coding upstream 130851 26739797 ~ 26743615 (+)
G1679269 NA non-coding downstream 38247 26918515 ~ 26918734 (+)
G1679280 NA non-coding downstream 50677 26930945 ~ 26931213 (+)
G1679285 NA non-coding downstream 79254 26959522 ~ 26960038 (+)
G1679307 NA non-coding downstream 100734 26981002 ~ 26981231 (+)
G1679786 NA non-coding downstream 114779 26995047 ~ 26996738 (+)
G1679135 NA other upstream 98786 26700392 ~ 26775680 (+)
G1678963 NA other upstream 406513 26462194 ~ 26467953 (+)
G1677738 NA other upstream 1232852 25636691 ~ 25641614 (+)
G1679823 NA other downstream 204158 27084426 ~ 27087463 (+)
G1680230 NA other downstream 495086 27375354 ~ 27375819 (+)
G1681180 NA other downstream 1837093 28717361 ~ 28726495 (+)
G1681792 NA other downstream 1897738 28778006 ~ 28778409 (+)
lhcgr lhr other downstream 2576960 29437357 ~ 29458499 (+)

Expression


Co-expression Network