trnaa-ugc-146


Basic Information

Item Value
gene id trnaa-ugc-146
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 29390320 ~ 29390393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-146
GTCCcacgtggctcagttggtagagcatggcgcttgcaacgccagagttgtgggttcgattcccatggggaACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-146 True 74 mRNA 0.59 1 29390320 29390393

Neighbor

gene id symbol gene type direction distance location
LOC110499310 epas1 coding upstream 34219 29285885 ~ 29356101 (+)
LOC110499309 prkce coding upstream 109690 29127739 ~ 29280630 (+)
LOC110499307 NA coding upstream 453668 28892178 ~ 28936652 (+)
six3a six3 coding upstream 537992 28849051 ~ 28852328 (+)
camkmt camkmt coding upstream 644739 28548493 ~ 28745581 (+)
ankrd1a LOC106589708 coding downstream 33301 29423694 ~ 29428859 (+)
lhcgr lhr coding downstream 46964 29437357 ~ 29458499 (+)
mertka LOC106589725 coding downstream 79638 29470031 ~ 29508296 (+)
tmem87b LOC106589726 coding downstream 120468 29510861 ~ 29536419 (+)
LOC110499316 LOC106589729 coding downstream 182004 29572397 ~ 29588171 (+)
G1682440 NA non-coding upstream 7719 29382396 ~ 29382601 (+)
G1682427 NA non-coding upstream 27111 29362836 ~ 29363209 (+)
G1682426 NA non-coding upstream 29304 29360733 ~ 29361016 (+)
G1682169 NA non-coding upstream 193140 29196652 ~ 29197180 (+)
G1682164 NA non-coding upstream 201728 29186781 ~ 29188592 (+)
G1682418 NA non-coding downstream 5422 29395815 ~ 29396294 (+)
G1682489 LOC106589727 non-coding downstream 150959 29541352 ~ 29543464 (+)
G1682544 NA non-coding downstream 199457 29589850 ~ 29590169 (+)
G1682545 NA non-coding downstream 199940 29590333 ~ 29590539 (+)
G1682546 LOC106589730 non-coding downstream 200799 29591192 ~ 29591591 (+)
G1681792 NA other upstream 611911 28778006 ~ 28778409 (+)
G1681180 NA other upstream 663825 28717361 ~ 28726495 (+)
G1680230 NA other upstream 2014501 27375354 ~ 27375819 (+)
G1679823 NA other upstream 2302857 27084426 ~ 27087463 (+)
G1679135 NA other upstream 2614640 26700392 ~ 26775680 (+)
G1686317 LOC106589755 other downstream 3263961 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 3786900 33177293 ~ 33196167 (+)
G1687675 NA other downstream 4935444 34325837 ~ 34326254 (+)

Expression


Co-expression Network