Item | Value |
---|---|
gene id | LOC110499315 |
gene name | LOC106589727 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048584.1 |
NCBI id | CM023238.2 |
chromosome length | 46616863 |
location | 29541315 ~ 29571033 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
fibulin-7-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036956143.1 | False | 3477 | mRNA | 0.45 | 8 | 29541339 | 29571026 |
XM_036956141.1 | False | 3551 | mRNA | 0.45 | 8 | 29541339 | 29571031 |
XM_036956144.1 | False | 3376 | mRNA | 0.45 | 7 | 29541339 | 29571033 |
TU1925354 | False | 2028 | TUCP | 0.43 | 6 | 29541315 | 29546317 |
TU1925344 | False | 2343 | TUCP | 0.42 | 4 | 29541348 | 29546317 |
TU1925348 | False | 2169 | TUCP | 0.42 | 5 | 29541348 | 29546317 |
TU1925350 | False | 2228 | TUCP | 0.42 | 5 | 29541348 | 29546317 |
TU1925352 | True | 2111 | TUCP | 0.43 | 5 | 29541348 | 29546317 |
29,540,000
29,544,000
29,548,000
29,552,000
29,556,000
29,560,000
29,564,000
29,568,000
29,572,000
29,572,000
29,576,000
29,580,000
29,584,000
29,588,000
29,592,000
29,596,000
29,600,000
29,604,000
NC_048584.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110499311 | LOC106589723 | coding | downstream | 136754 | 29395784 ~ 29404585 (-) |
srbd1 | srbd1 | coding | downstream | 417647 | 29026199 ~ 29123692 (-) |
LOC118941999 | NA | coding | downstream | 594600 | 28941146 ~ 28946739 (-) |
six2a | six2 | coding | downstream | 649754 | 28888248 ~ 28891585 (-) |
prepl | prepl | coding | downstream | 992930 | 28536167 ~ 28548409 (-) |
LOC110499317 | LOC106589730 | coding | upstream | 16530 | 29587563 ~ 29600822 (-) |
itga9 | LOC106589731 | coding | upstream | 35673 | 29606706 ~ 29746328 (-) |
golga4 | golga4 | coding | upstream | 176192 | 29747225 ~ 29801837 (-) |
fbxo11a | fbxo11 | coding | upstream | 489093 | 30060126 ~ 30093714 (-) |
foxn2a | foxn2 | coding | upstream | 537649 | 30108682 ~ 30158650 (-) |
G1683225 | NA | non-coding | downstream | 4950 | 29533652 ~ 29536389 (-) |
G1683188 | LOC106589725 | non-coding | downstream | 33078 | 29506532 ~ 29508261 (-) |
G1683175 | NA | non-coding | downstream | 63090 | 29477340 ~ 29478249 (-) |
G1683165 | NA | non-coding | downstream | 76608 | 29464197 ~ 29464731 (-) |
G1683112 | NA | non-coding | downstream | 161568 | 29379503 ~ 29379771 (-) |
G1683251 | NA | non-coding | upstream | 27709 | 29598742 ~ 29599028 (-) |
G1683252 | NA | non-coding | upstream | 28110 | 29599143 ~ 29599406 (-) |
G1683269 | NA | non-coding | upstream | 137131 | 29708164 ~ 29708616 (-) |
G1683407 | NA | non-coding | upstream | 387017 | 29958050 ~ 29961061 (-) |
G1683486 | NA | non-coding | upstream | 531307 | 30102340 ~ 30103392 (-) |
G1681658 | NA | other | downstream | 1005530 | 28535295 ~ 28535809 (-) |
G1681623 | NA | other | downstream | 1067314 | 28473285 ~ 28474025 (-) |
fa36a | fa36a | other | downstream | 1676511 | 27860741 ~ 27864828 (-) |
LOC110499285 | olig3 | other | downstream | 1790909 | 27748849 ~ 27750461 (-) |
sf3b5 | sf3b5 | other | downstream | 2156731 | 27381985 ~ 27384608 (-) |
G1684661 | NA | other | upstream | 1540522 | 31111555 ~ 31113686 (-) |
G1684920 | NA | other | upstream | 1836561 | 31407594 ~ 31412844 (-) |
LOC110499342 | LOC106589762 | other | upstream | 3240674 | 32810995 ~ 32812999 (-) |
G1686887 | NA | other | upstream | 3506777 | 33077810 ~ 33078027 (-) |
LOC110499358 | LOC106589782 | other | upstream | 3962640 | 33530945 ~ 33535225 (-) |