Item | Value |
---|---|
gene id | LOC110499326 |
gene name | LOC106589746 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048584.1 |
NCBI id | CM023238.2 |
chromosome length | 46616863 |
location | 31734856 ~ 31806658 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036956185.1 | False | 8056 | mRNA | 0.51 | 44 | 31734856 | 31806658 |
XM_036956186.1 | False | 7999 | mRNA | 0.51 | 43 | 31734856 | 31806658 |
TU1927759 | True | 1348 | lncRNA | 0.39 | 1 | 31734856 | 31736203 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110498787 | nrxn1 | coding | downstream | 569585 | 30608566 ~ 31165271 (-) |
LOC110498786 | LOC106589743 | coding | downstream | 1425592 | 30271979 ~ 30309264 (-) |
foxn2a | foxn2 | coding | downstream | 1576206 | 30108682 ~ 30158650 (-) |
fbxo11a | fbxo11 | coding | downstream | 1641142 | 30060126 ~ 30093714 (-) |
golga4 | golga4 | coding | downstream | 1933019 | 29747225 ~ 29801837 (-) |
LOC110499330 | LOC106589750 | coding | upstream | 336851 | 32143509 ~ 32226222 (-) |
LOC110499332 | LOC106588150 | coding | upstream | 348279 | 32154937 ~ 32158796 (-) |
LOC118942460 | NA | coding | upstream | 695471 | 32502129 ~ 32502308 (-) |
LOC118942014 | NA | coding | upstream | 848299 | 32654957 ~ 32656185 (-) |
LOC110499335 | LOC106589755 | coding | upstream | 853563 | 32660221 ~ 32661706 (-) |
G1685378 | NA | non-coding | downstream | 1990 | 31731642 ~ 31732866 (-) |
G1685342 | NA | non-coding | downstream | 9018 | 31724819 ~ 31725838 (-) |
G1685370 | LOC108238713 | non-coding | downstream | 23547 | 31710691 ~ 31711309 (-) |
G1685366 | NA | non-coding | downstream | 37720 | 31696908 ~ 31697136 (-) |
G1685344 | NA | non-coding | downstream | 64304 | 31670341 ~ 31670552 (-) |
G1685883 | NA | non-coding | upstream | 76078 | 31882736 ~ 31883899 (-) |
G1686013 | NA | non-coding | upstream | 282165 | 32088823 ~ 32089175 (-) |
G1686015 | LOC106569078 | non-coding | upstream | 284473 | 32091131 ~ 32091380 (-) |
G1686017 | NA | non-coding | upstream | 285345 | 32092003 ~ 32092291 (-) |
G1686103 | kcnk1 | non-coding | upstream | 451966 | 32258624 ~ 32272244 (-) |
G1684920 | NA | other | downstream | 322012 | 31407594 ~ 31412844 (-) |
G1684661 | NA | other | downstream | 621170 | 31111555 ~ 31113686 (-) |
LOC110499315 | LOC106589727 | other | downstream | 2188539 | 29541315 ~ 29571033 (-) |
G1681658 | NA | other | downstream | 3199047 | 28535295 ~ 28535809 (-) |
G1681623 | NA | other | downstream | 3260831 | 28473285 ~ 28474025 (-) |
LOC110499342 | LOC106589762 | other | upstream | 1005049 | 32810995 ~ 32812999 (-) |
G1686887 | NA | other | upstream | 1271152 | 33077810 ~ 33078027 (-) |
LOC110499358 | LOC106589782 | other | upstream | 1727015 | 33530945 ~ 33535225 (-) |
G1687007 | LOC106589782 | other | upstream | 1737028 | 33531084 ~ 33544238 (-) |
G1689130 | NA | other | upstream | 3452331 | 35258989 ~ 35259818 (-) |