LOC110499332 (LOC106588150)


Basic Information

Item Value
gene id LOC110499332
gene name LOC106588150
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32154937 ~ 32158796 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956194.1
GTGCGATGAGTGGTGGAGGGAGTGTGCGATGAGTGGTGGAGGGAGTGTGCGATGAGTGGTGGAGGGAGTGTGTGATGAGTGGTGTCATCAGTGTCATCATGGAGGGAGTGTGTGATGAGTGGGGTCATCAGTGTCATCATGGAGGGAGTGTGTGATGAGTGGGGCCATCGTGGAGGGAGTGTGTGATGAGTGGGGCCATCAGTGCCATCATGGAGGGAGTGTGTGATGAGTGGTGGAGGGAGTGTGTGATGGGTGGTGGAGGGAGTGTGTGATGGGTGGTGGAAAGGGTGTGTGATGAGTGGGGCCATCAGTGCCATCGTGGAGGGGGTGTGTGATGAGTGGGGGAGCAAGTTATTTGCTCTGGGAACAGATGGAGCTGCTGTGATGACCGGAGCCAAGGATGGTGTGGTCACCCGGCTGAAGGGGGACAGGGCCATCATTGGCATACACTGACCTTTTCTGATGCCATCGGGTCCAACGTGATGTTTCAGAAAGTAGAAGACCTccccagtgggctctataccaGCCCACTGAACAGTGAAAACCTGGTAAACAGCTTCCAGGCTCTTTGGCGGCACACCACTGGTGCCCACCAGAATTGTCGGGACCCGATGGGTAGGACACCTACTGCGTGCACACGAACACTTCCTGCGAGGTTACCAGGGGCGTGTCCAGCACCTGGAACAGAACAATCTGCTGATGCCCAAAATGTCTGAGGTGTCCAGCAGTCCAAGGCCAGGAAATACTACAGTACTACGAGGGAGGCTGTTGTCTGCTTCTGTGGCTTCCTGCAtgacacactaacacacctgagcaacctgtctgcctgtctgcagaGGTTCACCATCACCATAGCAACCTGTCTGCCTATCTGCAGAGGTTCACCACAGCAGAAGCCCACAGCTCCTTGTGCTCAACACAGGCATTACTTAAGAAGTACAAAACCAGGTATGTTTAGTTAAGCTGCAATAAGAACTACTTACCTTAAGAGAGGACAATTCTGAAAGGATGGTAAGATGAGCCTGTTATCGTCAGAGAAGGGCCCATGATGAAGGCCACAATGCCCAACAGATATGAGGGAATTTTGCTGGCCATAGGTGAGAGCAAGACCCTCGTTACATCACAAAATACTTGACATGCTAGTGGAGAGTATGACCGACAGGTTCCAGAACACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGAGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTTTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGTTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGACCTGTGTGCCACCAAGCTGGTCAGCTTCACCAGTGTAGGGGTCCTGTGTGCCACCAAGCTGTTCAGCTTCACCAGTGTAGGGGACCTGTGTGCCACCAAGCTGGTCAGCTTCACCAACTGCCCAGAGTCAGGAGATGAAGCAGCAGGttactttatgttttgtattACAGGGTGGTTGGGTTCAGGTTCAAGGTTCAGGTTCATATTTTTAAAGTTTGAGAATTAAAACTGCATTGTGCTTGTTGTAATGTATACAATTATTCTAGATTTTGGAGACACTGGACACCCTGGTGAACCACTTCCTGTCCTGGAGACCTCTGGCATCCATGTTGAAAGGATCCCTGACCAGTGGACTGTCCTGAAAGTGCTGATGTACCAAGAGCCGCAGTCCCCTGCAGAAGATGTCCTGGTTCTGTATCAACAGTAGCCATCAGCAGTCCTGCCCTGATTTGCTGGCATTGGTTGACCTGGTCCCATCCTTCCCTGCCTCCACAGCTGAATGTGAAAGAGGTTTTAATACCATGAAACAGGTGAAAACCGATTGGCGGTCCAACCTAAAGTCTGATACAGTGTCAGATCTTATGGTCCAGCTGTCCTCTCCAGAGATCAGGGAGTATGATCCGATAAAAGCTGTGATGCTGTGGCACCAGGACTCTGTCAGGAGTAGGAGGCCAGACTTCATGGACTGTGCAAAAGAGGGTGATTGTAGTAGAGAGTGAGGAGTCTGAGGAGGTTTAAGTTTATTTAAATGATTAAGCATCTGATAGGTTTACAAACcttcaaatgtacttttatgTTTGATCCTTAAGTACATGTAATAACAAATACTTCAGTAGAATTTTGAGTTCAAGACTTAAGTTGTATTCAGGCTGGGAAATGAAATGTAGCCACAGCCAAAATTAACCAGCGTCTGACAAGTCTCTATTTTACCAGGGTATTTCTACTCAAAGTAAAGGATTTGTAGACCTGTTTCCCCTTTGTATCAGTTCCACTGCACTTCTCATAATTGTATCTTCCCATTGTTGTTGCCCTGTTTTGACTTCTATGTACTCTTATTCATTGTATCtgaaatgttttgtttatttcattGTGTGCCCACTGTTGGGTGTTTTTTCACTCTGTACAGCACGTTTGGTCAGCTACAGTTGTATTTAAATGTGCTCTACAAATAAACTTGATTTGATTAACCGTTGATCAATATATTAAAATTTTGTTTCAAATTTGGCTCTGGTCTCTTAAGTTTGTATTCAACATAACTTATTATCTCAGTGAAATGTACATGTGACACAAAAAGGCAATTCATTATTTTGGCTGGTAAAAACATATGCTTGGTAGGTGAGCCAAAAAGTTATTTTCTTGAGACTTGGGTATGAGCATGCGTGTATGGGTTACAAAATTCTAGTTGGAGGTTCCCAGAATTAAgagggaatcctccaaccagaaTTTCTGAAAAGCCAGCGAACTTTGGGAAAGTTTCAAAGTTCGGTTCAATTTCAGTTAGTCTGTAAGAATGAGATGAAACCATTTCTGAATGGGCTTTATCATCGGTTTGGATGTATGCGTTAActgtctgtcccctccctcccc
>XR_005037979.1
GTGCGATGAGTGGTGGAGGGAGTGTGCGATGAGTGGTGGAGGGAGTGTGCGATGAGTGGTGGAGGGAGTGTGTGATGAGTGGTGTCATCAGTGTCATCATGGAGGGAGTGTGTGATGAGTGGGGTCATCAGTGTCATCATGGAGGGAGTGTGTGATGAGTGGGGCCATCGTGGAGGGAGTGTGTGATGAGTGGGGCCATCAGTGCCATCATGGAGGGAGTGTGTGATGAGTGGTGGAGGGAGTGTGTGATGGGTGGTGGAGGGAGTGTGTGATGGGTGGTGGAAAGGGTGTGTGATGAGTGGGGCCATCAGTGCCATCGTGGAGGGGGTGTGTGATGAGTGGGGGAGCAAGTTATTTGCTCTGGGAACAGATGGAGCTGCTGTGATGACCGGAGCCAAGGATGGTGTGGTCACCCGGCTGAAGGGGGACAGGGCCATCATTGGCATACACTGACCTTTTCTGATGCCATCGGGTCCAACGTGATGTTTCAGAAAGTAGAAGACCTccccagtgggctctataccaGCCCACTGAACAGTGAAAACCTGGTAAACAGCTTCCAGGCTCTTTGGCGGCACACCACTGGTGCCCACCAGAATTGTCGGGACCCGATGGGTAGGACACCTACTGCGTGCACACGAACACTTCCTGCGAGGTTACCAGGGGCGTGTCCAGCACCTGGAACAGAACAATCTGCTGATGCCCAAAATGTCTGAGGTGTCCAGCAGTCCAAGGCCAGGAAATACTACAGTACTACGAGGGAGGCTGTTGTCTGCTTCTGTGGCTTCCTGCAtgacacactaacacacctgagcaacctgtctgcctgtctgcagaGGTTCACCATCACCATAGCAACCTGTCTGCCTATCTGCAGAGGTTCACCACAGCAGAAGCCCACAGCTCCTTGTGCTCAACACAGGCATTACTTAAGAAGTACAAAACCAGATTTTGGAGACACTGGACACCCTGGTGAACCACTTCCTGTCCTGGAGACCTCTGGCATCCATGTTGAAAGGATCCCTGACCAGTGGACTGTCCTGAAAGTGCTGATGTACCAAGAGCCGCAGTCCCCTGCAGAAGATGTCCTGGTTCTGTATCAACAGTAGCCATCAGCAGTCCTGCCCTGATTTGCTGGCATTGGTTGACCTGGTCCCATCCTTCCCTGCCTCCACAGCTGAATGTGAAAGAGGTTTTAATACCATGAAACAGGTGAAAACCGATTGGCGGTCCAACCTAAAGTCTGATACAGTGTCAGATCTTATGGTCCAGCTGTCCTCTCCAGAGATCAGGGAGTATGATCCGATAAAAGCTGTGATGCTGTGGCACCAGGACTCTGTCAGGAGTAGGAGGCCAGACTTCATGGACTGTGCAAAAGAGGGTGATTGTAGTAGAGAGTGAGGAGTCTGAGGAGGTTTAAGTTTATTTAAATGATTAAGCATCTGATAGGTTTACAAACcttcaaatgtacttttatgTTTGATCCTTAAGTACATGTAATAACAAATACTTCAGTAGAATTTTGAGTTCAAGACTTAAGTTGTATTCAGGCTGGGAAATGAAATGTAGCCACAGCCAAAATTAACCAGCGTCTGACAAGTCTCTATTTTACCAGGGTATTTCTACTCAAAGTAAAGGATTTGTAGACCTGTTTCCCCTTTGTATCAGTTCCACTGCACTTCTCATAATTGTATCTTCCCATTGTTGTTGCCCTGTTTTGACTTCTATGTACTCTTATTCATTGTATCtgaaatgttttgtttatttcattGTGTGCCCACTGTTGGGTGTTTTTTCACTCTGTACAGCACGTTTGGTCAGCTACAGTTGTATTTAAATGTGCTCTACAAATAAACTTGATTTGATTAACCGTTGATCAATATATTAAAATTTTGTTTCAAATTTGGCTCTGGTCTCTTAAGTTTGTATTCAACATAACTTATTATCTCAGTGAAATGTACATGTGACACAAAAAGGCAATTCATTATTTTGGCTGGTAAAAACATATGCTTGGTAGGTGAGCCAAAAAGTTATTTTCTTGAGACTTGGGTATGAGCATGCGTGTATGGGTTACAAAATTCTAGTTGGAGGTTCCCAGAATTAAgagggaatcctccaaccagaaTTTCTGAAAAGCCAGCGAACTTTGGGAAAGTTTCAAAGTTCGGTTCAATTTCAGTTAGTCTGTAAGAATGAGATGAAACCATTTCTGAATGGGCTTTATCATCGGTTTGGATGTATGCGTTAActgtctgtcccctccctcccc

Function

NR:

description
PREDICTED: zinc finger protein 862-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956194.1 False 3659 mRNA 0.50 2 32154937 32158796
XR_005037979.1 True 2269 mRNA 0.47 3 32154937 32158796
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110499326 LOC106589746 coding downstream 348279 31734856 ~ 31806658 (-)
LOC110498787 nrxn1 coding downstream 989666 30608566 ~ 31165271 (-)
LOC110498786 LOC106589743 coding downstream 1845673 30271979 ~ 30309264 (-)
foxn2a foxn2 coding downstream 1996287 30108682 ~ 30158650 (-)
fbxo11a fbxo11 coding downstream 2061223 30060126 ~ 30093714 (-)
LOC118942460 NA coding upstream 343333 32502129 ~ 32502308 (-)
LOC118942014 NA coding upstream 496161 32654957 ~ 32656185 (-)
LOC110499335 LOC106589755 coding upstream 501425 32660221 ~ 32661706 (-)
LOC110499337 LOC106589758 coding upstream 517574 32676370 ~ 32688426 (-)
LOC110499340 NA coding upstream 543922 32702718 ~ 32704453 (-)
G1686017 NA non-coding downstream 62646 32092003 ~ 32092291 (-)
G1686015 LOC106569078 non-coding downstream 63557 32091131 ~ 32091380 (-)
G1686013 NA non-coding downstream 65762 32088823 ~ 32089175 (-)
G1685883 NA non-coding downstream 271038 31882736 ~ 31883899 (-)
G1686103 kcnk1 non-coding upstream 99828 32258624 ~ 32272244 (-)
G1686128 NA non-coding upstream 151338 32310134 ~ 32314207 (-)
G1686157 NA non-coding upstream 239323 32398119 ~ 32398482 (-)
G1686170 NA non-coding upstream 268278 32427074 ~ 32466581 (-)
G1686188 NA non-coding upstream 295098 32453894 ~ 32456754 (-)
G1684920 NA other downstream 742093 31407594 ~ 31412844 (-)
G1684661 NA other downstream 1041251 31111555 ~ 31113686 (-)
LOC110499315 LOC106589727 other downstream 2608620 29541315 ~ 29571033 (-)
G1681658 NA other downstream 3619128 28535295 ~ 28535809 (-)
G1681623 NA other downstream 3680912 28473285 ~ 28474025 (-)
LOC110499342 LOC106589762 other upstream 652911 32810995 ~ 32812999 (-)
G1686887 NA other upstream 919014 33077810 ~ 33078027 (-)
LOC110499358 LOC106589782 other upstream 1374877 33530945 ~ 33535225 (-)
G1687007 LOC106589782 other upstream 1384890 33531084 ~ 33544238 (-)
G1689130 NA other upstream 3100193 35258989 ~ 35259818 (-)

Expression

LOC110499332(LOC106588150) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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LOC110499332(LOC106588150) Expression in each Bioproject

Bar chart with 21 bars.
LOC110499332(LOC106588150) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network