LOC110499335 (LOC106589755)


Basic Information

Item Value
gene id LOC110499335
gene name LOC106589755
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32660221 ~ 32661706 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576418.2
ccccgagagagagagaggggggagtggaaAGGAAACGGAAAAGACGAAACACACACAATCCTCCTAATTTCAAAACCCCGGACTGTGCAGAAGAAAAGACAACTCGCTGAAGAAAATAACACTTCTAACCACCTATTTTATTTGTCAATCTAACCTCCCTTTTACTTTTCCGTTTTTTCTGTCCTTATTATCAGTCGGTGGTAGATTGAACTCCCCTGCTCTACTCAGTAAAAGGTTCCAGTGTTCGCTGGAGCAGAGATGCCCCCCCAGCCGGAGGTGAGCACACATTTCCGGGACTTCCTCAAGAGTTTTCTCGGCATCATCCGAATTCTCCAAATCCTATTCGGAGCTGGACTATGGGTCACAATCGCCGCCAACAAATACGAAGGCTCCATCCACTTCGTCCTGTTTGtggcagtcctcttctggctcctCACCCTCGCCGCCTTCTTCATCACTCTCCTGGACAAGAAGGACCTCGTCCCCATTTTAGGAGGGGACCGGTGGTTGCTTAGCAACCTTCTTCACGACATCGCGGCCGCGGTGCTTTATCTACCGGTGATCGGCGTCATGATCTACAAAACGGAGCGCTACGCATACTGCAACCTGGAGCAATACAAACACAACTGCCTGTATAAAGTCTACCTGGCTGCCACTGTGTTCGCATGTCTGGGCGCTGTGGTGTATCTTGTCTCCGCGGTGTATATGGGCTGTAGGAAGTGCCGGGGTGAGCAGACGGTGGtttgagagagaagggaggacagaggggaacCGAGTGAGGGATAGGGCAGAGGACTGGTGGAGGGAGGCAAGAGCTTTCCCTGGATAGGGGAGAGGACACGGGTGGAGAGGGGGTATTTTATGTCCTCAAACTGTCTTCTTGGCTCAAACTCCTACAGGTTTGTCCATATTCTGTTCCGTAATTTAATGTCAGTATCATTTCAGTAGCTTACcaaagtatatattttatatttttatctgtgtgtttttttgttggaCCATAATACTTTTTTGGTAGGCCTACTCCAGTGTTTTTGTTTTGACTGACAACAACATTCCAAAGCTCTGAGATGTCCAGTCCAGGCATGGGCGTGTTATCTGTGCCTTTAAAAACATACCTTATGCTTTTCAGCCTACAACAAGCTGTAATAGCAAGGACATGAGATTATATGCCTTTGATATGAAAATAACTACACCATATTTGTTGATAATGTTTTTAAGTGTTCTTTTAGCAAGAATGAATCCTTGTCTATATCAAAAACAAAACCAAGTCTGTTCCTAATTAAAGTGTTCTTTGTGTTAAGACCAAATGTTGATGCATTAAAACCAATGTCAGGGTTATTTTCTTTGGTAATAACACTGTCATTAATGCCGGAGTACCAGCATCTTAAACGTTCTGCTGCTTGAGCTTCTGTTCCTATTATAGAATATTATCTGAAAGCATTATGGAGCTCCTGAACCTACATATAAAGTGTACTGGCACACA

Function

NR:

description
MARVEL domain-containing protein 1-like

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576418.2 True 1486 mRNA 0.45 1 32660221 32661706

Neighbor

gene id symbol gene type direction distance location
LOC118942014 NA coding downstream 4036 32654957 ~ 32656185 (-)
LOC118942460 NA coding downstream 157913 32502129 ~ 32502308 (-)
LOC110499330 LOC106589750 coding downstream 433999 32143509 ~ 32226222 (-)
LOC110499332 LOC106588150 coding downstream 501425 32154937 ~ 32158796 (-)
LOC110499326 LOC106589746 coding downstream 853563 31734856 ~ 31806658 (-)
LOC110499337 LOC106589758 coding upstream 14664 32676370 ~ 32688426 (-)
LOC110499340 NA coding upstream 41012 32702718 ~ 32704453 (-)
LOC110499342 LOC106589762 coding upstream 149289 32810995 ~ 32812999 (-)
LOC110499343 LOC106589761 coding upstream 154681 32816387 ~ 32821014 (-)
LOC110499345 LOC106589764 coding upstream 208809 32870515 ~ 32902674 (-)
G1686414 NA non-coding downstream 31227 32628785 ~ 32628994 (-)
G1686413 NA non-coding downstream 31705 32628300 ~ 32628516 (-)
G1686412 NA non-coding downstream 32459 32627535 ~ 32627762 (-)
G1686405 NA non-coding downstream 52125 32607666 ~ 32608096 (-)
G1686284 NA non-coding downstream 56385 32603570 ~ 32603836 (-)
G1686453 NA non-coding upstream 32090 32693796 ~ 32694289 (-)
G1686454 NA non-coding upstream 45363 32707069 ~ 32707817 (-)
G1686455 NA non-coding upstream 46217 32707923 ~ 32708137 (-)
G1686456 NA non-coding upstream 46511 32708217 ~ 32708540 (-)
G1686457 NA non-coding upstream 47929 32709635 ~ 32709927 (-)
G1684920 NA other downstream 1247377 31407594 ~ 31412844 (-)
G1684661 NA other downstream 1546535 31111555 ~ 31113686 (-)
LOC110499315 LOC106589727 other downstream 3113904 29541315 ~ 29571033 (-)
G1681658 NA other downstream 4124412 28535295 ~ 28535809 (-)
G1681623 NA other downstream 4186196 28473285 ~ 28474025 (-)
G1686887 NA other upstream 416104 33077810 ~ 33078027 (-)
LOC110499358 LOC106589782 other upstream 871967 33530945 ~ 33535225 (-)
G1687007 LOC106589782 other upstream 881980 33531084 ~ 33544238 (-)
G1689130 NA other upstream 2597283 35258989 ~ 35259818 (-)

Expression


Co-expression Network