st3gal7 (LOC106589773)


Basic Information

Item Value
gene id st3gal7
gene name LOC106589773
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33163695 ~ 33175005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956207.1
CAGATGTAGAATCAGCTCACCCTCACCTTAATCTAAACGTTTACCACAAGTAGTACAAAcgcaaaactgaccttagatcagcggTTAGGGACATCTTCAGTTTAGTGTGGCAGCCATTTTAGCTGATTATAGTAATTTGCCTTCTTGTTCGTCCCCAGAGCATGGAGGACAGAAGAAGAACACCACAGACGACTGCTGTCTACAGACTTTCTCTAACATCTCTGAGCCCCTAGTCTTTAGGTTAGCATGGTGACTCTGAAACACCTTAGTGTGGAGGATCCAGATGACTACAGCTCTCCTCCGGTGCCTGATGCTGACTTCACTGAGATAACAGCTGTTACAGTTACACACAGGAGACCTACACCTGACACCAGGGAGATGCTACTCAGCAGGACTAACAACCTAGCCTTGAGTCTAGTACTGCTGGTGGGATGCTACTCTGCTATCCTGGTCCCTGCTCTTATACCTTCAGACCCTCTGTCAGGGGCTAACGACAACCAACACACTGACATGgtatTACTAAACCGCTCTGCCTCCCTGCTTGTGCAGCCCTGCCATCCGGGCTGGTGTGTGtctcgtctcctctccctggactcCTCCTCAGACCTTCAGAACATCCCTGTGTTCCTCCAGTCGGGGATTGCAGCAGACAGGCCTATTccctgggacttggctcctccccTGGGCCTCCAGGGCTGTGACGAGAGGGTGGCTAGGGCCCTGGCCTCTCTAACTCATCCAGGCCTGCCCCCATCCCTGGGGGGGAGAGGTAGGGGTGGGGGCTGTAGGAGGTGTGTGGTGGTGGGCAGTGGAGGGGTGCTACATGGCAGCCACCTGGGATCCCATATTGACCAGTATGATGTCATCATCAGGATGAACAATGCCCCAGTGTCAGGGTTTGAGAGGGACGCAGGCTCCAGGACCACTGTCCGTTTGATGTACCCAGAGGGAGCTCCCCTTTCCCCCAGCGAGTACAGACAcacctccctggttaccctggtgGTCTACAAGTGCCTGGACCTGGACTggctcacctctgtcatcaccaAGCAGCCTCTGAGCTGGTGGTCCAAGCTGTGGTTCTGGAGAGACATAGTGGAGAACATTCCTCTGAAGCCGGAGAACATCCAGATACTCAACCCAGAGATCATGCACAAGACAGGCATAGCACTGCAGAGATACACACAGCAACAGAGGAAGttAGTTCCTACGTTAGGTGCCAGTGCGGTGGTGATGGCCCTACAGCTGTGTGATGAGGTGAGCCTGGCAGGGTTTGGTTATGACCTGCAGCATCCCGGTGCCAGACTACACTACTATGAGAGTCTAAGTATGGACGCCATCAAGGCCCagGTAGTACATGATGTGAACGCTGAGAAGCTCTTCCTCAGAGAGCTAGTGGCTGCAGGAGTCTTGACTGACCTCACAGGGGCGCTGTGACAAAGAGACAGTACCAGGGATGGACCCTGTTCTACCAGTTGTGGTtggaggttaactgccttgctcaaggacagaacggcagatttttccaccttgccggctcggggattcgaaccagcgacctttcttAACAACCCCTGGTTCCTTTTCCTAGCATGATGATTCAACCAATCAAGGCTTAGTTGAAATATGTACTATTATTATATACTATATTATGCACTATAAAAATGTATGCACCCattactgtaagtcgctttggataaaggtGTCTGCTAAATGTCATATGTAATTATTATATATTAAATGCCCAAAGCAGCCGTTTGTATAtcgatatcaaatcatttct

Function

NR:

description
lactosylceramide alpha-2,3-sialyltransferase-like

GO:

id name namespace
GO:0043412 macromolecule modification biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008373 sialyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956207.1 True 1783 mRNA 0.51 8 33163695 33175005

Neighbor

gene id symbol gene type direction distance location
LOC118942059 NA coding downstream 222923 32929005 ~ 32940772 (-)
LOC110499345 LOC106589764 coding downstream 261021 32870515 ~ 32902674 (-)
LOC110499343 LOC106589761 coding downstream 342681 32816387 ~ 32821014 (-)
LOC110499342 LOC106589762 coding downstream 350696 32810995 ~ 32812999 (-)
LOC110499340 NA coding downstream 459242 32702718 ~ 32704453 (-)
morn4 LOC106589769 coding upstream 29190 33204195 ~ 33210568 (-)
LOC110499533 slit1 coding upstream 117270 33292275 ~ 33472601 (-)
LOC110499355 LOC106589782 coding upstream 300689 33475694 ~ 33486258 (-)
LOC110499353 LOC106589782 coding upstream 314346 33489351 ~ 33499919 (-)
LOC118942062 LOC106589782 coding upstream 328005 33503010 ~ 33514611 (-)
G1686929 NA non-coding downstream 9412 33153771 ~ 33154283 (-)
G1686928 NA non-coding downstream 12023 33151303 ~ 33151672 (-)
G1686925 NA non-coding downstream 15853 33147470 ~ 33147842 (-)
G1686924 NA non-coding downstream 16266 33147169 ~ 33147429 (-)
G1686923 NA non-coding downstream 16731 33146753 ~ 33146964 (-)
G1686938 NA non-coding upstream 6586 33181591 ~ 33181963 (-)
G1686940 NA non-coding upstream 23435 33198440 ~ 33201162 (-)
G1687005 NA non-coding upstream 114191 33289196 ~ 33289616 (-)
G1687025 NA non-coding upstream 170553 33345558 ~ 33347098 (-)
G1686887 NA other downstream 85668 33077810 ~ 33078027 (-)
G1684920 NA other downstream 1750851 31407594 ~ 31412844 (-)
G1684661 NA other downstream 2050009 31111555 ~ 31113686 (-)
LOC110499315 LOC106589727 other downstream 3617378 29541315 ~ 29571033 (-)
LOC110499358 LOC106589782 other upstream 358668 33530945 ~ 33535225 (-)
G1687007 LOC106589782 other upstream 368681 33531084 ~ 33544238 (-)
G1689130 NA other upstream 2083984 35258989 ~ 35259818 (-)
G1689131 NA other upstream 2084881 35259886 ~ 35260208 (-)
G1689461 NA other upstream 2303109 35478114 ~ 35480057 (-)

Expression


Co-expression Network