fam83b (LOC106589806)


Basic Information

Item Value
gene id fam83b
gene name LOC106589806
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34414349 ~ 34435461 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956237.1
CTCCATCCACAGAGGGCTTCTCATGTTGAGACACCTCCTTGTCTTTGTTACTTCAGTTGGCAGATATCAGCTTTTGCTCCAATACGGCTACACAGTCAGAAGAATACATTGAAAAATGCAGTACTGGAATTTATTGGGAAACTACAACAGGATCTTTCTTTAACTCATACTTTTAATCATCCACCATCTGTAACAGAACGCACTAAGCCACCCTTATGATGGATTCCCAACAACTCTCCCTGCTGTCCTCCTTGAAGGAAGAGTTGAAGCCTGAAGATTACATTCAGCCCCACTATAAGGAGGCCTATCGCCTTGCCATTGATTCCCTGGTGAATGACGGCAGAGAGAGCTACCAGGAGTTCCTCAAGTCCGAGCGGATAGGGAGCTTCCTCTCAGAAGATGAAATCCACTTCATCACTACAAACGCCTCACAGCCATTGCCTAGCAACCACACAGAAGAAATTGATGGCCCAGGTCCGGACGCTACGGCCAGCAAGTCTTCAACTGGAACGTACTGGCCTGTGGACTCCGACATAGCAACACCTGACTTGGAGTTAGGGTGGCCGGAGGTCATGCCTGATAGACTACAAACCAATATAAATCTGTTCTTCCATCCACCCAGACTAAACAGACCCACCATCAAAGAGGTGATCCGGAAACACATTCAGGATGCCAGACAGGTTATTGCAATTGTAATGGACATTTTTACAGATGTGGATATATTCAAAGAGGTGGTTGATGCCTCCACCAGAGGAATTCCAGTTTATGTGCTTCTGGATGAATTTCATCTGCAAAGCTTTCTCTTAATGGTTGAGAATCAAGACATCCAAATCCCAAAACTTAGGAACATGAGAGTACGCATAGTGAAGGGTCAGGATTACCTCTGTCGTTCAGGAGCTACATTTCATGGAGCAATGGAGCAGAGGTTTCTGTTGGTGGACTGCCAAACAGTGGTGTACGGATCATACAGCTTCATGTGGTCCTATGAGAAAATCAACCTGAGTATGGTGCAGGTCATAACAGGCCAGCTGGTGGAGTCCTATGACGAGGAGTTTAGAACGCTCTTCGCCCGTTCTTTCGTGCCAGCAGTTCTCACCCCTCCCGAGACTGTGCTACTAGAACGGAATGGAAGACATGCTAGGGCAAAGTATGCTTCTGAATCCAGACAAGCCTTTGAGAGGAAGGACCAGTTGAGACATACCCTGGACACAGTGTACAGGAAAGCCTGTGAGAGACAGACGGGCATGACGAGCCAtatgggagagatggaggagagacttTATGACAAGGAGCCATTTGAACACAGACCCATGATCAACCATGGCGAGAGTGTTCAAAACCGCATCCATCAGTTCCAGTCTGCAGAGACTGTGAACTTCCTGAAAAGGCACAGTTATGCTGGGGAGAGACAAGAAGTCCCATATGTTCCACACAACACAAGGTATGGGGCAAGCAACTGGAACGTGGCTGGAGATGGAGGTAATCACTGCGCTCCTGGAAGAAGCCACTTTACCAATGCTTTGGAAGACCATTCTCAGGGGGCACAGATAATCAGAGGTCGCAATTTTCGCCAGTCCTACCACGGGAATGACAAACAAGTCCGCTCTATGCAGCGGAACATGCCAACTTTGAAGAACACGGCTAAGTCCTTCTTGCGCACGTATAGGATAGAGTCTTACCTCAATAACACTGATGATCATACTGGGGAATCCTGTGACTATCTGGACCAGTATGAAGCACAGGAAAACAAAACTAGCTCATTGATTCCTTCCAGACTTAGGTCATCCCTTGTTTTCAAGTCCACTATTCCAGAAAAACCGGAGACAAACAGTCACTCAAACAACTCTTCCTCTTCCATACGTCAGGTCGACCCCTCTGCAAAGCCAAACAATGCACCGTATTACTCTTCAATGCAATTGCAATGGAATCCAGCAACATCGATGGAAAACAGAATGAGACAAGATGAATACATAATGAAAAGGCGGAGTCTGCAGATTTTGGATGATCCTAGGAATAACATTGGCTATGGCCCAGGAAGAGACCCATATCAGTCGGTCTATGCCTGCCTGGGAAGAGCCAAAGAGGGACTGGTAACGAAAGCCCCTGAGCTCCTTCAAGACAACTGGCACAAAAGACACAGTGTGGCAGACTCAAAGACCAACAGTGACTACAGAGTCAATAAAGAGTCCTCCAGTCACATGTACGGTAGGGCCTTTGGGAGGAGTCAGCCAGATGGTGGTGGAATAACATTGGGTCCACAGAATGGAGGATATTCTTCAAATTTGAACAAGGATCAGAGATCTATCTCTCATTATGACGTCAAAAACGTTGTGGACACAAAGAGCCCCCCTGTTTCTAATTGGCAAGAGCCTCCCTACAGAACTGTGTCTGCAGCAGCCCTTGATATGAACAGCAAAGAGCCTCCCTACAGAACTGTGTCTGCAGCAGCCCTGGATATGAACAGCAAAGAGCCTCCCTACAGAACTGTGTCTGCAGCAGCCCTTGATATGAACAGCAAAGAGCCCACTTACAAGTCCACCAGCACAGCATTGGGTTCACCACATTTCCTTAAGAAGAGCACCAAGCAAATCAGATCATTGCTCAAAATACCGGAGAAAAAAGAGGGTTCCCCTAAAGGGGGTTCCCCTAAAAGGGGTGGTAGCTCTGACACCATAGTCACAGACGAAGAGGGACaaataccagagagagagaggaaggttgcATCACAGAGTAGCATGCTTCAGATGGACAAGAACCACTGTGCAGATGATATAGGGTTATCCTCAACCCCTCGTTTTAGCACTGAAGAGCTGCACCAAAATCTTCCTGACAGAACTACATCCATGGGGACACAGGGGCAGCATACGTCCATTGATAAAACGCAAGAAAGGGCAAGGCTTGCGTCAGGAAATTGGCGTAGCGATCGGGGTGGCGATAGTCGTTTGTATAGCAGATTTGAGCCTTTCTGTTCATTGGAGAAGGAGCGACCCCATTTCTCACAATCTGCAACAGGCCCTGCCCCCATACACTCCCCAGAGAGGACCAAGAGCATGTACTCTGCTAAAAGTAGCCCCACCAATGAACAACACAACCACACTGGCCAGCAGACACATAGCCACCATGAAAACAAACTGGGCAAATTCATACAAAGAGTGGGGCATTTCATTCACAAAAATAAGTAGTAGAAAAGAAAGTTAACATAATACAACATGGATTACTGGTCAAATTTACAAAAGCGTTCAAGGGCCCAATCAAATGGTAGGCAGAGTGGAAACAGTGTACTGCACTATTTAACTTGAAAACTGGTTACATGAAGAGATTACATCCTTTTAGGACTCTTTAAGGCAATTGCAAACCGATTTTTACTTGAATTAAAGGGGGGGGATCAGCACGGTCCAGGACAAGGTATCACAAACTGTGAAATCAAGTCAGGGGCCCACAGTGTCAGTCAGAAACAGCAGAACCGGATCTGCAGCATGGCCAAGTGAACAgggaccacaggaggttggtggcagggttcatggtaatggctggagcagatttagtggaatggtataaaatacatcaaacacatgtttgatgccattccatttgctccgttccagacattattatgaaccgtcctcccttcagcagcctccaatgACAGGGACAGCCAGGAATTGGCAGgccaggttgtcctgaggcaCAGTCCAAGGTCCTTGTGGTAGGGGAGACAGAACTAGAAGGGAATTAGTGGTCAGCGGCAGGGAATCCGAGTGGGGAGCCGGCCAAGCAGAGACCGAAAGGGTGGCTCgtcactccagtaccttgacgtTGATAAGTCTTCAGTCCAAGACTAAAAGATGTAAGataaaagtgtgtgtttgtgtgtgagtgtgtttgtacaCTTTAGTGTGGGGAAACACTGAACACAAATTTGTTACATCTTATTTGCTCTTCAAGTCTAAGAGTGCTTTAATATGTTATGCTTTTTGGTCTTTAATACATCAAAGATCTATATTCTTCATAATATATCAAAGCCATTCGCATTTTTTTTAAACCCAGAACCAATCAGCTGCTCGATGGCTGTGACGAGAGACTAAAAGTTAACTACAATAGGAGGAATTCATAATGCAGTAGCTTCATTTCCATATAAAACACATTAAATCATTTCATTTTAAAGATGTCTTCACAATAACAACTCTGATCAAAAGAGTGAAAACAATCTATTTGTTAGCCACAATATCAGAAAAACATATCCAGAGTACAGGATTTACAGTGCGTAAATTGCCTGATTGGGTGAATGAGTTCGTTTGTCAAAACCTAATGCCGCTTTTGTCATCATTGCAGTGTCTGGAGTATTTTTCTTGGAACAATGTCTTGGCAAAATATGCTTGGATTTGACAGGTGTTGTGGGAAATGCAGTGGTATTATGAGGGACTAATTTAGGGAAATGTACATTGTTTGTCAAATATTTGACCTGTACAAACACTGACAAAGTTGGTTGAAAAATATAGTTGCTTTTTCCAAACAAATGTGACATTGTGTTTTTGTTACCTTTGATCCTTTGTTGTATGAGCTACAGGGAAGTGCATCCTACAGTACCACCATGAGGTGAAGTATTTATTTCAGTCTGTTTAAGCTACAAAATCATTTTTGGGCCAGGTTGTATGTGTTAGTATTCAACCCATTCCTCTGACAAGCTAAAGACAATTTCACAGTCAACGTGATATATAAGCATGAGTTGAATAGAGCACAGCATTATTTTTGTGTTTTGCATTCCACTGATTCTGGACTATTTGAACCACACTTTTTTGAACCATGCCTTTTCATTAGACAGGGCTCCTACTGTCACTAAGTACTTCAACACCTCAATCTTTCACATCACATAGGAAGTGTATCATTCAATGTGAAGTTCACAGAGTGTATGCATGCAGGCATTCAGCTGCTTGTAATTGATATGGGAATAATTGTCATTGCATCAGGTTTACAAGAAATCACAttcataataaaatggtggtgggggggggggggggggcatatgaTGTATGGAAGGTTGGGAATTGTTCTATAgaaactttttttaaatctgtgtttgaaaataGGATGTTGGTATTTGCTCTCGATAAGCACAAGTGAACACTTGGCCCTTTTATAATTTGAATTTAATTACCTGTTGTTGCGTTGTGTTTTCCATCTTTAGTAATGATGAGAATAGATATTGTCCAATGGATCTGTTATAATTTAGAGCTATGAGGTCTGAATTATGAGATTGTAGCTTACAAGAGGTTGTATGGAGGTCAGCATTATGACCATCAAGTCAGAAGCATCATTTTGTAATGTCGCTAGGAAGATGTGTCATTGCAATCAGTTTGTCCCACTGGGTTTCTAATTTGTGCAATATGTAATAAATATGCAATGGAATAAACTGCTTCCAAA

Function

NR:

description
protein FAM83B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956237.1 True 5421 mRNA 0.44 6 34414349 34435461

Neighbor

gene id symbol gene type direction distance location
hcrtr2 hcrtr2 coding downstream 7518 34390070 ~ 34406831 (-)
gfral LOC106589804 coding downstream 24764 34380038 ~ 34389585 (-)
trnav-uac-22 NA coding downstream 281872 34132402 ~ 34132477 (-)
znf451 znf451 coding downstream 430459 33972142 ~ 33983890 (-)
bag2 bag2 coding downstream 442525 33969088 ~ 33971824 (-)
mlip LOC106589807 coding upstream 19102 34454563 ~ 34498964 (-)
lrrc1 LOC106589808 coding upstream 81777 34517238 ~ 34557314 (-)
eloal LOC106589809 coding upstream 123935 34559396 ~ 34568186 (-)
fbxo9 LOC106589812 coding upstream 171694 34607155 ~ 34612817 (-)
LOC110499388 LOC106589793 coding upstream 196461 34631922 ~ 34634132 (-)
G1688246 NA non-coding downstream 24532 34389608 ~ 34389817 (-)
G1688188 NA non-coding downstream 80200 34333847 ~ 34334149 (-)
G1688186 NA non-coding downstream 82258 34331880 ~ 34332091 (-)
G1688185 NA non-coding downstream 82711 34331430 ~ 34331638 (-)
G1688291 NA non-coding upstream 71530 34506991 ~ 34507206 (-)
G1688215 NA non-coding upstream 117993 34553454 ~ 34627016 (-)
G1688328 gsh1 non-coding upstream 152690 34588151 ~ 34588969 (-)
G1688337 NA non-coding upstream 186580 34622041 ~ 34622397 (-)
G1688356 LOC106589817 non-coding upstream 232203 34667664 ~ 34668042 (-)
G1687007 LOC106589782 other downstream 870111 33531084 ~ 33544238 (-)
LOC110499358 LOC106589782 other downstream 880073 33530945 ~ 33535225 (-)
G1686887 NA other downstream 1336322 33077810 ~ 33078027 (-)
LOC110499342 LOC106589762 other downstream 1601495 32810995 ~ 32812999 (-)
G1684920 NA other downstream 3001505 31407594 ~ 31412844 (-)
G1689130 NA other upstream 823528 35258989 ~ 35259818 (-)
G1689131 NA other upstream 824425 35259886 ~ 35260208 (-)
G1689461 NA other upstream 1042653 35478114 ~ 35480057 (-)
G1689556 NA other upstream 1207907 35643368 ~ 35643777 (-)
LOC110499416 dnah17 other upstream 1430239 35864651 ~ 35951415 (-)

Expression


Co-expression Network