eloal (LOC106589809)


Basic Information

Item Value
gene id eloal
gene name LOC106589809
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34559396 ~ 34568186 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576490.2
TTATATAACCTGACTGTGGTGCAGCAGCGCTTTCGGGTCAATGAATGCACGTGAGCCAACGTGATGGACGCACTTGACGTGTCGAAGAAAGTGCTGCAGTTAAAAGTTCAGCTCAAAGAAACGACAGAATCAAAGAAGGTCCTGAAAATCTTAAAGAAACTAAGGGAGTTGGATATAACCCTAGACATTCTTGCAGAGACCGGAATCGGCAAAGCTGTAAACTCTTTGCGCAAGCATGGAGATGCAGGAGAAGCTGTTAGGCTATTGGTCAGTCACTGGAAGAAATTGGTTCCTAAAGAAACCTTGAGCCATACAGAGAAGGAGGATGCTTCACAGAGCAAGCTTTTGGTAACCGATGCAGAGACTCAAAACCGTTCAAAAGAGGCGTGCTCAAAAATAGAGGACCGAAGTCAAAATGCTTCAGAAGATGAGCGTTTAAAAACCGATGAGGACAACCAAGATGGTCCTACTTCAAGAGGGGTGCATTTGAAAACTGATGAGAAAAACAAAGGCACTTCAGAAAAAGAGCATTTGAAAACTGACAGAAATGAAGAAAGTTTGGAAACTGAATACAAAAACCAAGGTACTTCCAAAGATGAGCATTTGAAAACTGAAGACAAAAACCAAGGTACTGCAGAGATGTCTCATTTACAGGAAGTAGATGAAGACTCAAGTGAATTGAAAAATGATCATTTTAAAAGTGAGAAGGAAAACAAGCGTACTTGGAAGAAGGACAaggatgaggggaaaaaacagaaGGGGACACGAGAGTGTTTAATGGTTACTGGGAAAAAAAGTAATTGGAGTAGAAATTCTGAAGATGAAAATGTTGTGCTGCCAAACACAACATTTTCATCTAAGAGCAGCCACAAGAAAGCCAAGTCGATTTCCAGGGAAGAATCTAACAACAAATCAGATAACGGAGGGAAAAGTGGGGTAAGGAGAGACTCCAATACAGAAACACTGCCGTGTCCTAAACCATCCAGCGACGAGTCATCAAAATCTAAACCGGATAGAAAATGGACAGTTATTGACAAATCCAATGACCAAGACAAAACAGCGAGTGACTCCCTAGGTTGTAATGGAGAGAGGCGGAAACCAAGTGAAAGAAAGCAAGTCTGCCATGAAGACAAAAAGACTAAACAAGAGGGAATATCGAAGACCAAAGAGAAAATGGCGATTGAGGACAAGTCGAATGGCGATGACGTCGAAGTGCCCTCCATGTCTTTTGAGTCTTTCTTGAGCTATGACATCAACACGCCTAAGAGGAAGAAAAAATCTGACAGTAAAAAAACACCTAAGAAACTTAAGACTGTTGAAAAAGAAGTAAAGGTTGTGAAGACACACAGCACGAAATCCAATAAGCAGTTACCTGCGGCGACTGCAGATTTTTCACTGCCTAAAAAGGCTATGAAGGGGTCTGTGATGGACTTGCTTAATATTCCATTGCCAACATTTCTACCCGAATATGACGAGCTCTCCAACTTTAACTACTACGACAGGAAAATGGAAGAGAAATCTAAAGTCTTGGTCTCTGAGGGCCCGGTCTTCACTGGTCAAAGACTCAACCGGAAGATGCAGGTCTATTCTGGTGCAAAGTCCGCCTTTCTCCCAACCATGATGTCCTTGTACCAGCAATGTATTCGGGCACTGCAGAACAACATTGACTTGCTCTATGAGATCGGAGGGGTCCCATTTGAAATCCTTGAGCCAGTACTAGAGCGCTGTACACCTGATCAGCTGTTTCGTATTGAAGAGTGCAACCCGATGTATGTTGGCTTGACTGATCACTTATGGGAGAAGCACTGTCAGCGGGACTTCAGGAATGCCCATCTAGAGGAGTAcgagtcctggagagagatgcaTATGAGGCTAtctgaggaaagggagaggaagcTCCAAAGACTGACTAAAACCATAGTCTCTGCCCATTCAGGAAAACCCAAAGGCCGGCAGGTGAAAATGGCGTTTATTAACTCTGTTGCCAAGCCGCCTAGAAATGTGAGAATTCAGCAAGAGATCCATGGAACTGCAAGACATCCACGAATCCAGCAGGAGAACAATGGACCTACTGGTGTCGTACTGCCACCTCACCCACTGGACAGGCCCAGtgtCAAGGCCCAGGAAAACAGAGCCAGACCCTGCTATGTTGAACCTCCTAGGCCTAGCACCACTGTCTCTGGGACAAGCCAAGGACAAGATTCCCGCAAAAAAACACGGGTGGCACCTATGATGGCAAAGTCTCTGAAGGCCTTTAAAACGATGGGGCGTAGATGAAGGCCCTAAGAGGATGGATGGACTGCTGGAAACTGTTGTGGATACAGGTGCATTGATTCCACTTCATGCCTCCTTTTCACTATTCATTCCAGGCCAAAATGTCCCTTTCTTGGCCTACTTTACTTTTTGAGACCAAATTGGAGCTGtaactatacactgagtatacaaaacattaaggacacctgttgtttccatgagactgaccagttgaatccaagtgaaagctatgatcccttattgatgtcacttgttaaattcatttcaatcagtgtagatgggggggggggggggggagatgggctaaagaaggatttttaagccttgagacatggcttgtggcattcagagggtgaattggcaagaacggtacgacatccagccaacttgacaactgtggaatgctttcggcactttgtagagtccattcctgacgaattaaggctgttctgaggggtggggggtgtgcaactcaatattaggaaggtgtgttcttaatgttttgtatactcagtgtagctATTGGGCCGGGCCATCTTTGTATGAAGTTTTTTGCCCGTGCTGCTTGTAAAACAATTGCTGCATTTGAACGATGGGTATGTTTCAATGTTATTTGTTTGTTCATATTGTCAAACACTGAATTGCACTATTAAATAAGATGAAAACCATG

Function

NR:

description
elongin-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576490.2 True 2944 mRNA 0.44 11 34559396 34568186

Neighbor

gene id symbol gene type direction distance location
lrrc1 LOC106589808 coding downstream 2082 34517238 ~ 34557314 (-)
mlip LOC106589807 coding downstream 60432 34454563 ~ 34498964 (-)
fam83b LOC106589806 coding downstream 123935 34414349 ~ 34435461 (-)
hcrtr2 hcrtr2 coding downstream 152565 34390070 ~ 34406831 (-)
gfral LOC106589804 coding downstream 169811 34380038 ~ 34389585 (-)
fbxo9 LOC106589812 coding upstream 38969 34607155 ~ 34612817 (-)
LOC110499388 LOC106589793 coding upstream 63736 34631922 ~ 34634132 (-)
LOC110499389 LOC106589814 coding upstream 67969 34636155 ~ 34648964 (-)
LOC110499538 LOC106589816 coding upstream 81088 34649274 ~ 34683421 (-)
LOC110499392 LOC106589818 coding upstream 705028 35273214 ~ 35310189 (-)
G1688291 NA non-coding downstream 52190 34506991 ~ 34507206 (-)
G1688246 NA non-coding downstream 169579 34389608 ~ 34389817 (-)
G1688188 NA non-coding downstream 225247 34333847 ~ 34334149 (-)
G1688186 NA non-coding downstream 227305 34331880 ~ 34332091 (-)
G1688328 gsh1 non-coding upstream 19965 34588151 ~ 34588969 (-)
G1688337 NA non-coding upstream 53855 34622041 ~ 34622397 (-)
G1688356 LOC106589817 non-coding upstream 99478 34667664 ~ 34668042 (-)
G1688355 NA non-coding upstream 102315 34670501 ~ 34671859 (-)
G1688389 NA non-coding upstream 153766 34721952 ~ 34741730 (-)
G1687007 LOC106589782 other downstream 1015158 33531084 ~ 33544238 (-)
LOC110499358 LOC106589782 other downstream 1025120 33530945 ~ 33535225 (-)
G1686887 NA other downstream 1481369 33077810 ~ 33078027 (-)
LOC110499342 LOC106589762 other downstream 1746542 32810995 ~ 32812999 (-)
G1684920 NA other downstream 3146552 31407594 ~ 31412844 (-)
G1689130 NA other upstream 690803 35258989 ~ 35259818 (-)
G1689131 NA other upstream 691700 35259886 ~ 35260208 (-)
G1689461 NA other upstream 909928 35478114 ~ 35480057 (-)
G1689556 NA other upstream 1075182 35643368 ~ 35643777 (-)
LOC110499416 dnah17 other upstream 1297514 35864651 ~ 35951415 (-)

Expression


Co-expression Network