elovl5 (LOC100192340)


Basic Information

Item Value
gene id elovl5
gene name LOC100192340
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34594957 ~ 34606103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956241.1
TGTGTGATGATCACTGCCAATGAGGTAGGCCATTCGGGTGTCTGATAGCCAATTATCTACCATCTGAAGATGATAGCCTAATAGCTAGATCTCGTCACTTATGACGCTCAGGACAATTTGCCATATAGACTGAGTTCTTGTGTTTCTCCCGCTGCTTCCACTGACCGACGAGGCTGCACGTTTGTGCTTTGGGACCTGGGCAGGCAAGATTACGCATCCTCCAGAGGTTAGAAATGGAGGCTTTTAATCATAAACTTAACACGTACATAGACTCATGGATGGGTCCCAGAGATGAACGGGTACAGGGATGGCTGCTGCTAGACAACTACCCTCCAACCTTTGCACTAACACTCATGTACTTGCTGATCGTATGGCTGGGGCCCAAGTACATGAGACACAGACAGCCGGTGTCTTGCCAGGGCCTCCTGGTGCTCTACAATCTGGCCCTCACTCTATTATCTTTCTATATGTTCTATGAGATGGTGTCTGCTGTGTGGCAAGGGGGTTATAACTTCTACTGCCAAGACACACACAGTGCGGGAGAAACAGATACCAAGATCATAAATGTGCTGTGGTGGTACTACTTCTCCAAGGTCATAGAGTTTATGGACACCTTCTTCTTCATCCTACGGAAGAACAACCATCAGATCActtttctgcacatctaccaccaCGCTAGCATGCTCAACATCTGGTGGTTCGTCATGAACTGGGTGCCCTGTGGTCACTCCTACTTTGGTGCCTCCCTCAACAGCTTCATCCATGTCCTGATGTACTCTTACTATGGGCTCTCTGCTGTCCCGGCCATACGGCCCTATCTATGGTGGAAGAGATATATCACACAAGGCCAGCTGATTCAATTCTTTTTGACCATGTCCCAGACCATCTGTGCAGTCATTTGGCCATGTGGTTTCCCCAGAGGCTGGCTGTTTTTCCAAATATTCTATATGGCCTCGCTTATTGCCCTTTTCTCAAACTTCTACATTCAGACTTACAAGAAACACCGTGTTTCCCAAAAGAAGGCGTATCACCAGAATGGCTCTGTTGATTCCCTGAATGGCCATGCGAATGGGGTGACACCCACGGAAACCATTACACACAGGAAAGTGCGGGCGGACTGAAGCTTGAATAACCTCACAATCCTAACTTTTGTGCATATCTACTATGTATGTAATATTGCTAGGAGCGATGTAGGATTTCTTATGAAGAAATGTATTAGAAGAGCATAGCTAGTTTATTCACAATATAAGAAAAGCAATGTTAATCTGAAAGAGATTCGTTTTGCACACCGCTGTCTGTTACTCTTCATATTGAATCTAAGTTATTTACAGTTAAGTAACAAGGATAGCAGAGGGAGCACAGTACAGAACAGCCCCAGATACCCACTTCCTTTTAATGCTGCACAAGATTTTTGATAATGTCTGGTGGGACATCGCTTTATTAAGCAACCTTGACCCATACAGAAATAACAATGTTTTTCCATGTTTTAATTCACAACATATGCACTTGTCTACATGCTAGATTGTGTCCTGATTGGACAAATCAGGACAAAAATCTATTTTGGGGTTTCCCTTGCATAGAGACAAGGCTGTCGGAGTCAAATGTGTCCACTGAGTAACTTTAGAGAGGTTCACCTTCATCGTTTGCATTGTAAAGTTTAGTTTAAAACCAGTTGCAATAATAGATTTGTCTATTGTCTGTATCAGTCAAACAGGTTTGAAAGGTATTTGTCCGTCAAATGGCACTGATCAGAACAATATTTTATGTGAACAAGAAATACTATAAATTCAGTTTTATTTTAGGTCTTGCTTTAGATAATGCTGTTGTTGTAGCAATAGTTTACATACAAGGACATTTTATGAGAGCCCtaatctcttgtggacagatGCAGGTAACATAAATCGAGCATCTGACGCAATTGTGCGATTTTAGTTCTGGGTGTCCGTGACTATTCCTCTACAGTAGCAATTTAGTTTCTATCTAATCTTTTCCCAGTTGGAATATTTATTTCCTACTTTATTGCAACACATTATACAACAAAAAGCTAAAATCACACTGATAGTGTCATGGATTGTGTTAAAAATAGATGAAGTGTGTTGAAATAGTTACATGTGTCTACTCAGCCCTCAGAATTCAGCCCCATATGATATTAATGTATGCATACATGACTGTAAATCACTTTGTATAACAGCGTCTGCCAAATGGCTTATTGTTATATGACATATATTCTCATTATCTCTCTGAACCCAAAGTCACCATTTTACTGTTATATGtgctgagaatttcaacctcATCTCCATGGAATGCGGAAAACAATTAATACAATTATAAACCAAACTTAAACTCTGTATCATATTTAATATAGTTTAAATATATGTGCTGTGTTTTAAACCCATTCCTCCCTCTTACACTAGTGTTTCCCTCATTAGATTGAATCAGGATAAAAGTTACATCAAGCCATGATGTGACTATTGTGTTTTCTCCAAAGCGTTGCCTTAATAGATGTTGCTACCTATATGTTTAACTTGTTCCCTTCGTTATGGAATTGTATTATAGTCCATGTATGCCTTAATTATGAAATACAGGGGCCAAATCGCCAACTTCTGTTGTAGAGATGTGTCTCGCTTTGAAAGCCTTTTAAAGTGCTTATCTATGGCTGGGTTTACACATACGGTCCAATGCAGATTTTTttcttcactaattggtcttttgaccaatcagatcagctcagaagtagatctgatgtgaaaagatctgatatgattggtcaaaagaccaatttaaACGCAACCTAAATCAACTGAAGGATGTAATCTACTGTTGAAATGTGGCTGGATGAATGATGTAGTTCTGGGTGTCCTTTGAAATGTGGTCAGATGAATGATGTCATCAACTGTTGTAAATGTGGTCAGATGAATGATGTCATCAACTGTTGAAATGAGGTCAGATGAATGATGTCATCAACTTTTGAAATGTGGTCAGATGAATGATGTAATCAACTTTTGTAAATGTGGTCAGATGAATTATGTCATCAACTGTTGAAATGTGGTCAGATGAATGCCGTTTTGAGAGAGAAACAGCAGGACACAACATTATTATGTCCTCACAATCTGTGAATAGACTGCAAAATCAGATTTGTATCCACAGTAATCTGTAGAAATGTACTCAGCTTTCTAACAATGCAAGTGAAGCCAGCCTCGAAGCTGTTGCATTTGTAATGTCACTGAGATTGGAATTAATAAAAGCATTCATGCTTCATCTGGATCTCCCATGGTGTATTTCAGGCATCATTCTAGAATCTAGATGGAGCACTCTGATCAAGTCACA

Function

NR:

description
elongation of very long chain fatty acids protein 5-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K10244 ELOVL5; elongation of very long chain fatty acids protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956241.1 True 3327 mRNA 0.40 8 34594957 34606103

Neighbor

gene id symbol gene type direction distance location
gclc gsh1 coding upstream 3637 34583316 ~ 34591320 (+)
klhl31 LOC106589810 coding upstream 21077 34569055 ~ 34573880 (+)
LOC118942064 NA coding upstream 91291 34499031 ~ 34503666 (+)
hmgcll1 LOC106589805 coding upstream 215591 34347154 ~ 34379366 (+)
bmp5 LOC106589803 coding upstream 282807 34273867 ~ 34312150 (+)
LOC110499384 LOC106589811 coding downstream 9597 34615700 ~ 34626578 (+)
LOC110499387 gsta3 coding downstream 21116 34627219 ~ 34630262 (+)
LOC110499390 LOC106589817 coding downstream 49940 34656043 ~ 34671430 (+)
LOC110499597 NA coding downstream 78511 34684614 ~ 34685478 (+)
LOC110499391 LOC106589815 coding downstream 160666 34766769 ~ 35179392 (+)
G1687735 NA non-coding upstream 175670 34414763 ~ 34419287 (+)
G1687732 NA non-coding upstream 183235 34411521 ~ 34411722 (+)
G1687731 NA non-coding upstream 183547 34411190 ~ 34411410 (+)
G1687730 NA non-coding upstream 183935 34410818 ~ 34411022 (+)
G1687845 NA non-coding downstream 20615 34626718 ~ 34683245 (+)
G1688405 NA non-coding downstream 136728 34742831 ~ 34743036 (+)
G1688410 NA non-coding downstream 140754 34746857 ~ 34747323 (+)
G1688414 NA non-coding downstream 143901 34750004 ~ 34750436 (+)
G1687675 NA other upstream 268703 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 1409681 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1933309 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 5018399 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 5137036 29437357 ~ 29458499 (+)
LOC110499396 LOC106589821 other downstream 775606 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1075264 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1095117 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1275475 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 1514513 36120616 ~ 36125390 (+)

Expression


Co-expression Network