LOC110499387 (gsta3)


Basic Information

Item Value
gene id LOC110499387
gene name gsta3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34627219 ~ 34630262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576502.2
TTGCAGACATGCAAATCTCCAACTCAACTCTCATGTAGGTCATATGACACAGTGTTTGAGGTTCACTTCTTCGTTAGAAGCGTTTCGTAACTTTGTAAATTAACTTATTCGGagttcacacacacataacaggTGCATACTTGTCTCTTGATATATAAGTAAACTTCAATTTCGCCATGTCTGGAAAAGTGGTGTTGACTTATTTCAATGGGAGGGGGAGAATGGAGTCAATTCGATGGCTTTTAGCAGTTGCTGGAGTTGAGTTTGAAGAAGTGAATATAACAAAGCGTCAGGAATATGTAAAACTGTTGAGTGatggAGCACTCATGTTTGAGCAGGTTCCCTTGGTGGAAATGGATGGAATGAAGCTGGTTCAAACCAAGGCTATCCTGAACTACATAGCAGGGAAATACAATCTCTATGGGAAAGACTTAAAAGAACGAGTCATGATTGACATGTATGCTGAGGGCGTGCAGGACTTGATGCAAATGATGATGGCGTTGCCCTTCATGCCGCCTGACACCAAGGAAACTAAactggaggagatagagaggaaagCAACAAGCCGTTACCTCCCTGTGTTCGAGAAGGCGCTAATTGGCTCCCAGTACCTGGTGGGTTTTCAGTTGAGCTGTGCTGATGTCCAGCTACTTGAAACCACCTTGATGTTGGAGGAGAAATTTCCAACAATTCTTTCCAAATTCCCTGTTGTTAAGGCTTTTCAAGGGAAGATGAAAAGCCTACCAGCCATTCACAAGTTCCTGCAGCCAGGCAGCAAGAGGAAGCCTCAATCAGATGATGTATATGTAAAGACTGTGTGTGAGGTGTTAGACTTCAAGCTCTGATTCTCATCTAAACATCAAGTAAAATTGACTTTAAAGAGTTGaagctaatataatatattacctgtACATGGTTCCATATTGTCATTCCAAGTCATAATTTCTTGTAACATGTTGTGGAGAAATTATGACATAAGCTTATGAATTGTTTAACCCTGGCAATATGAGTGTGGTGTATTGTTTGCAAAATTGTTTTATAACTAGTTCCCTTTGTGCTCACAAGAAGTTTCCGACAATACCCAAGAGAAAACCTTGATTTACTTGGGTGAACGCCCAGAAATAGCCTCTGAGAACTTTATCAGGAGCAGGTGTCTTGTTACACATTCTCTTTTGTACCCAAAACTCCTCGTGCTGAGGATGAATCGTGTCTGTGTGAGTTGTGTGTATCCTAGTATAAAAGGTGCCTGGGGACAGTCCCCTCGTAGAGCTTCTGACCAACCTGTACTGAGTGTGCAGAGTTTGTTGTAACCTTTCCACTGGCGTGACTCTTAATAAAGTTAATTTACTAATTGACTTGAGTCCTTGATGGTAATTTCTATTACAATGTGTAAAGGACAATTGTTTAACGAGCACAAGTATTTAATGTTTTCCAATAATGTGCACAAAGAAAAAGGCTGTTGAACAAACAAAATATTTTCTGTAACTAAACCCTCTGTGTCTGTTGTGAGTTTTCCATCATTGATAGAGGATATTTACTGTCATGCAACTGAATATGATTATGTAAAACTACTGAAATGTTAGTAGTCAAACCTGCAAtactataaaatgtattttgtacgAGTAGTAAAtgccattgtatttctgttcccATATCCATTGAAAAAATCATAGTGTGCTTATAACCAGTAGTAAATTTAATTGTTCAA
>XM_021576503.2
ACATGCAAATCTCCAACTCAACTCTCATGTAGGTCATATGACACAGTGTTTGAGGTTCACTTCTTCGTTAGAAGCGTTTCGTAACTTTGTAAATTAACTTATTCGGagttcacacacacataacagTAAACTTCAATTTCGCCATGTCTGGAAAAGTGGTGTTGACTTATTTCAATGGGAGGGGGAGAATGGAGTCAATTCGATGGCTTTTAGCAGTTGCTGGAGTTGAGTTTGAAGAAGTGAATATAACAAAGCGTCAGGAATATGTAAAACTGTTGAGTGatggAGCACTCATGTTTGAGCAGGTTCCCTTGGTGGAAATGGATGGAATGAAGCTGGTTCAAACCAAGGCTATCCTGAACTACATAGCAGGGAAATACAATCTCTATGGGAAAGACTTAAAAGAACGAGTCATGATTGACATGTATGCTGAGGGCGTGCAGGACTTGATGCAAATGATGATGGCGTTGCCCTTCATGCCGCCTGACACCAAGGAAACTAAactggaggagatagagaggaaagCAACAAGCCGTTACCTCCCTGTGTTCGAGAAGGCGCTAATTGGCTCCCAGTACCTGGTGGGTTTTCAGTTGAGCTGTGCTGATGTCCAGCTACTTGAAACCACCTTGATGTTGGAGGAGAAATTTCCAACAATTCTTTCCAAATTCCCTGTTGTTAAGGCTTTTCAAGGGAAGATGAAAAGCCTACCAGCCATTCACAAGTTCCTGCAGCCAGGCAGCAAGAGGAAGCCTCAATCAGATGATGTATATGTAAAGACTGTGTGTGAGGTGTTAGACTTCAAGCTCTGATTCTCATCTAAACATCAAGTAAAATTGACTTTAAAGAGTTGaagctaatataatatattacctgtACATGGTTCCATATTGTCATTCCAAGTCATAATTTCTTGTAACATGTTGTGGAGAAATTATGACATAAGCTTATGAATTGTTTAACCCTGGCAATATGAGTGTGGTGTATTGTTTGCAAAATTGTTTTATAACTAGTTCCCTTTGTGCTCACAAGAAGTTTCCGACAATACCCAAGAGAAAACCTTGATTTACTTGGGTGAACGCCCAGAAATAGCCTCTGAGAACTTTATCAGGAGCAGGTGTCTTGTTACACATTCTCTTTTGTACCCAAAACTCCTCGTGCTGAGGATGAATCGTGTCTGTGTGAGTTGTGTGTATCCTAGTATAAAAGGTGCCTGGGGACAGTCCCCTCGTAGAGCTTCTGACCAACCTGTACTGAGTGTGCAGAGTTTGTTGTAACCTTTCCACTGGCGTGACTCTTAATAAAGTTAATTTACTAATTGACTTGAGTCCTTGATGGTAATTTCTATTACAATGTGTAAAGGACAATTGTTTAACGAGCACAAGTATTTAATGTTTTCCAATAATGTGCACAAAGAAAAAGGCTGTTGAACAAACAAAATATTTTCTGTAACTAAACCCTCTGTGTCTGTTGTGAGTTTTCCATCATTGATAGAGGATATTTACTGTCATGCAACTGAATATGATTATGTAAAACTACTGAAATGTTAGTAGTCAAACCTGCAAtactataaaatgtattttgtacgAGTAGTAAAtgccattgtatttctgttcccATATCCATTGAAAAAATCATAGTGTGCTTATAACCAGTAGTAAATTTAATTGTTCAA

Function

symbol description
gsta3 Predicted to enable glutathione transferase activity. Predicted to act upstream of or within glutathione metabolic process. Is expressed in brain; gill; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in asthma and ovarian cancer. Orthologous to several human genes including GSTA1 (glutathione S-transferase alpha 1); GSTA2 (glutathione S-transferase alpha 2); and GSTA4 (glutathione S-transferase alpha 4).

NR:

description
glutathione S-transferase 3-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004364 glutathione transferase activity molecular_function

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576502.2 False 1708 mRNA 0.39 7 34627219 34630262
XM_021576503.2 True 1675 mRNA 0.39 7 34627225 34630262

Neighbor

gene id symbol gene type direction distance location
LOC110499384 LOC106589811 coding upstream 641 34615700 ~ 34626578 (+)
elovl5 LOC100192340 coding upstream 21116 34594957 ~ 34606103 (+)
gclc gsh1 coding upstream 35899 34583316 ~ 34591320 (+)
klhl31 LOC106589810 coding upstream 53339 34569055 ~ 34573880 (+)
LOC118942064 NA coding upstream 123553 34499031 ~ 34503666 (+)
LOC110499390 LOC106589817 coding downstream 25781 34656043 ~ 34671430 (+)
LOC110499597 NA coding downstream 54352 34684614 ~ 34685478 (+)
LOC110499391 LOC106589815 coding downstream 136507 34766769 ~ 35179392 (+)
LOC110499393 LOC106589819 coding downstream 682349 35312611 ~ 35323282 (+)
LOC110499394 LOC106589820 coding downstream 708187 35338449 ~ 35374027 (+)
G1687735 NA non-coding upstream 207932 34414763 ~ 34419287 (+)
G1687732 NA non-coding upstream 215497 34411521 ~ 34411722 (+)
G1687731 NA non-coding upstream 215809 34411190 ~ 34411410 (+)
G1687730 NA non-coding upstream 216197 34410818 ~ 34411022 (+)
hmgcll1 LOC106589805 non-coding upstream 272463 34347154 ~ 34379366 (+)
G1688405 NA non-coding downstream 112569 34742831 ~ 34743036 (+)
G1688410 NA non-coding downstream 116595 34746857 ~ 34747323 (+)
G1688414 NA non-coding downstream 119742 34750004 ~ 34750436 (+)
G1688418 NA non-coding downstream 122180 34752442 ~ 34752902 (+)
G1687675 NA other upstream 300965 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 1441943 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1965571 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 5050661 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 5169298 29437357 ~ 29458499 (+)
LOC110499396 LOC106589821 other downstream 751447 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1051105 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1070958 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1251316 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 1490354 36120616 ~ 36125390 (+)

Expression


Co-expression Network