Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499597 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 34684614 ~ 34685478 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002469988.2 | False | 631 | mRNA | 0.41 | 2 | 34684614 | 34685478 |
| TU1930610 | True | 550 | lncRNA | 0.39 | 2 | 34684693 | 34685476 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499390 | LOC106589817 | coding | upstream | 13184 | 34656043 ~ 34671430 (+) |
| LOC110499387 | gsta3 | coding | upstream | 54352 | 34627219 ~ 34630262 (+) |
| LOC110499384 | LOC106589811 | coding | upstream | 58036 | 34615700 ~ 34626578 (+) |
| elovl5 | LOC100192340 | coding | upstream | 78511 | 34594957 ~ 34606103 (+) |
| gclc | gsh1 | coding | upstream | 93294 | 34583316 ~ 34591320 (+) |
| LOC110499391 | LOC106589815 | coding | downstream | 81291 | 34766769 ~ 35179392 (+) |
| LOC110499393 | LOC106589819 | coding | downstream | 627133 | 35312611 ~ 35323282 (+) |
| LOC110499394 | LOC106589820 | coding | downstream | 652971 | 35338449 ~ 35374027 (+) |
| LOC110499396 | LOC106589821 | coding | downstream | 696131 | 35381609 ~ 35384567 (+) |
| LOC110499398 | m4a15 | coding | downstream | 724761 | 35410239 ~ 35417932 (+) |
| G1687845 | NA | non-coding | upstream | 1369 | 34626718 ~ 34683245 (+) |
| G1687735 | NA | non-coding | upstream | 265327 | 34414763 ~ 34419287 (+) |
| G1687732 | NA | non-coding | upstream | 272892 | 34411521 ~ 34411722 (+) |
| G1687731 | NA | non-coding | upstream | 273204 | 34411190 ~ 34411410 (+) |
| G1687730 | NA | non-coding | upstream | 273592 | 34410818 ~ 34411022 (+) |
| G1688405 | NA | non-coding | downstream | 57353 | 34742831 ~ 34743036 (+) |
| G1688410 | NA | non-coding | downstream | 61379 | 34746857 ~ 34747323 (+) |
| G1688414 | NA | non-coding | downstream | 64526 | 34750004 ~ 34750436 (+) |
| G1688418 | NA | non-coding | downstream | 66964 | 34752442 ~ 34752902 (+) |
| G1688533 | NA | non-coding | downstream | 193728 | 34879206 ~ 34881587 (+) |
| G1687675 | NA | other | upstream | 358360 | 34325837 ~ 34326254 (+) |
| LOC118942060 | LOC106589768 | other | upstream | 1499338 | 33177293 ~ 33196167 (+) |
| G1686317 | LOC106589755 | other | upstream | 2022966 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 5108056 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 5226693 | 29437357 ~ 29458499 (+) |
| G1689347 | NA | other | downstream | 995889 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 1015742 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 1196100 | 35881578 ~ 35881874 (+) |
| G1689732 | LOC106612293 | other | downstream | 1435138 | 36120616 ~ 36125390 (+) |
