LOC110499398 (m4a15)


Basic Information

Item Value
gene id LOC110499398
gene name m4a15
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35410239 ~ 35417932 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576521.2
AAAACCTCAAAGTTAATGTCTGTTGGAAAGTTCAGAACGATTACCTCTTGATTTAGTCAACTGATCAACTCAATAGTTTGgtcgcagttgcaaatgagaacttgttctcaacctgcctacctggttaaataaaggtgacataaaataaataaatgtcgaTGAACATGGCGACCGACATCAGTCCagcagggggagaaggagggccATATACCACTATGGTGGGAGGAAGTAAACCACTGCACCGCTTCATCAGAGGCGAGCCAAAGAGTACTGGGATTGTAATGATGTTCATGGGATCATCACTCTTCATCTTGGGGATTCCAATGAGGCTGGATACACTGATGTCCTCTGCTGAGACTTTCACCCCTTTTTGGCTAGGAATCCTGTTCATCATCTCTGGGTTGTTATATGTGCTCACAGAGAAGAATCCTTCAAAACAACTGGTGACAGCAAGCCTGGCCCTTAGTATCATCTCTATGTTGGGGGTCACAGTGGCTTTCTTTGAATTCCTTAAAGGCATCGTGCACATTCGGCAATCATATGACTACTATGATCATTACCACTATGACTACAACGCCACAGAATCTGGCAGAGTTGTAGTCCCCTGGCGTAAACAACATATGcACCAGTTGATCAGCCTTGAGGCTGTATTTATGTACCAGAGCTTAGTAGGTATGGTGGTCCTAATTGTGATGACATCATTTGCCAGGGTTGCCCTGCATTCCAGCAAGACACAGGCAGTTGTGGTAATGCAAGATCTACCATCACCAGACTGAATAAAGAAAACAAGGCTTTTCTGACTGTCTCTGCCGTGATGAATAGATAGAAAATTTGGACTTGCCCATTGATATGAAATAAATGTATTCACAAATATGTAGAACATTTCTTTAAATCCACATATATGGAATTGTCTTTGTATACACTCGTATTTCTATACACTTGTACTTTGTAATAAATATAACATACaccaccagtcaaaa
>XM_021576520.2
CATACTCCCGCCCGCCCAACCATCCCCACACCCACCCGTCTCCCTCATGTAAATATCTCCCTCCAGTTGTGTAATATTAGTTCATCTACGCAGTTCAGGCAAGCCAGgtcgcagttgcaaatgagaacttgttctcaacctgcctacctggttaaataaaggtgacataaaataaataaatgtcgaTGAACATGGCGACCGACATCAGTCCagcagggggagaaggagggccATATACCACTATGGTGGGAGGAAGTAAACCACTGCACCGCTTCATCAGAGGCGAGCCAAAGAGTACTGGGATTGTAATGATGTTCATGGGATCATCACTCTTCATCTTGGGGATTCCAATGAGGCTGGATACACTGATGTCCTCTGCTGAGACTTTCACCCCTTTTTGGCTAGGAATCCTGTTCATCATCTCTGGGTTGTTATATGTGCTCACAGAGAAGAATCCTTCAAAACAACTGGTGACAGCAAGCCTGGCCCTTAGTATCATCTCTATGTTGGGGGTCACAGTGGCTTTCTTTGAATTCCTTAAAGGCATCGTGCACATTCGGCAATCATATGACTACTATGATCATTACCACTATGACTACAACGCCACAGAATCTGGCAGAGTTGTAGTCCCCTGGCGTAAACAACATATGcACCAGTTGATCAGCCTTGAGGCTGTATTTATGTACCAGAGCTTAGTAGGTATGGTGGTCCTAATTGTGATGACATCATTTGCCAGGGTTGCCCTGCATTCCAGCAAGACACAGGCAGTTGTGGTAATGCAAGATCTACCATCACCAGACTGAATAAA

Function

NR:

description
membrane-spanning 4-domains subfamily A member 15-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576521.2 False 980 mRNA 0.42 7 35410239 35417932
XM_021576520.2 True 808 mRNA 0.47 7 35410873 35417733

Neighbor

gene id symbol gene type direction distance location
LOC110499396 LOC106589821 coding upstream 25672 35381609 ~ 35384567 (+)
LOC110499394 LOC106589820 coding upstream 36212 35338449 ~ 35374027 (+)
LOC110499393 LOC106589819 coding upstream 86957 35312611 ~ 35323282 (+)
LOC110499391 LOC106589815 coding upstream 230847 34766769 ~ 35179392 (+)
LOC110499597 NA coding upstream 724761 34684614 ~ 34685478 (+)
LOC110499400 LOC100194728 coding downstream 21048 35438980 ~ 35446541 (+)
kifbp kif1bp coding downstream 47703 35465635 ~ 35468940 (+)
LOC110499404 srgn coding downstream 55688 35473620 ~ 35479099 (+)
LOC110499405 LOC106589824 coding downstream 74682 35492614 ~ 35498474 (+)
LOC110499406 LOC106589826 coding downstream 82847 35500779 ~ 35508659 (+)
G1689229 NA non-coding upstream 4625 35400704 ~ 35405614 (+)
G1689215 NA non-coding upstream 22403 35387536 ~ 35387836 (+)
G1689214 NA non-coding upstream 23642 35386265 ~ 35386597 (+)
G1689174 NA non-coding upstream 32165 35375600 ~ 35378074 (+)
G1689218 NA non-coding downstream 116 35418048 ~ 35420255 (+)
G1689245 NA non-coding downstream 16587 35434519 ~ 35515390 (+)
G1689303 NA non-coding downstream 132713 35550645 ~ 35551201 (+)
G1689337 NA non-coding downstream 199518 35617450 ~ 35617666 (+)
G1689342 NA non-coding downstream 224985 35642917 ~ 35643832 (+)
G1687675 NA other upstream 1083985 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2224963 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 2748591 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 5833681 29572397 ~ 29588171 (+)
G1689347 NA other downstream 263435 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 283288 35701200 ~ 35702156 (+)
G1689671 NA other downstream 463646 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 702684 36120616 ~ 36125390 (+)
G1690092 NA other downstream 846728 36264660 ~ 36264981 (+)

Expression


Co-expression Network