LOC110499404 (srgn)


Basic Information

Item Value
gene id LOC110499404
gene name srgn
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35473620 ~ 35479099 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956252.1
AACTTTCCATTGCGGATGTTAAACTTGCTAAAACGTCTGGTTTCAGGAAACAATGACGCATAAATGGGCAGGGTTTGGGGGTATTCAACAGTGCGATTAGGTGTACTTTCAGAATATTCACACACAAAGGTTATTCTTAAAAGCATATATTGTCGTCTCCTCATTACAGCATCGAAAATAATGAAAGGACTGAATTCGAAGATCTGTCTGACACTGGCTGTCATCTTCTTTCTCGCAGATAACGGACATGGGGCTCCAGCAAAAGGCAGATATATGTGGCTTAAATGCAGTCCAGACGCCAAGAATGCCAACTGTGAGACACAGAGGGGTCCCTGGATGGACTTGCCCGGGCCTCCTGACAGACTCCCTTCAATTGCCGTAAAGGATATAGTGCCAGAAGAGGCTGGCTCAGAGCCGGAGGAGCAGTCAGGCGAGGGTTCTGCCACAGGAATCCTTTTAACTGAGCAGGGCTCTGGCGACCAGTTGGGCAGCACAGATGTGGATGGGATTGACTACCCTGGCTTTGTCTTCCCACCGAAAATGACCATGGATCAGGTTCTGCCTCCTGCTCAGGAATTGAAAGAGGATCACCTGATCCTGTAGCCTGCCAGAATGCTAAATATTGAAATTGTGATGTCAATCCGGTTGTGTAAAATGCATTTTGCAACCTCTCATGATTCCATGAGCACCTTAAAACGGAATTTCCATTTGAATTATTGTATTTTCTGGTCAATGCAATCCGCATCTTATGAAAGTAGTAATACCATGCTATTTGACCCAGGTATTGATGCTTGGCTGTGTAAGATTGCATTTAGGTAACTGAAGAGTGGGAAATGTAAGTGGTTATAGCATCATTTACACAGTTTAGTTATTTCCCATGGAACCAAAGAGATCAAATTAATcgcttttttgtgtgtttttatttttaatacctgCCAAGAATGTAATTAATTAGATTTAACCAGTAGCCTTTATTTTTGAGCTCAGCAAATTATATTTTTCATACGGTTTTAAAACGTGTGCTTTTATTGTTTTCTTTTGCAATTAAATTTATAAGATACTATATGATAGTCTTTCCCTCTTCAAATATTGTCAAACATAATACTTTATTCAGAATATCCACAATTGTCACAATTTGATATTATATCATTCCACACTCATATTTTTTGGGAAGATTTAAATAAACGTGTTTTGATAATCCAATGGTATTTGAACCATAAACTATTTAAGGATATGGGATTAGGTTTCTTTAGTGGACATGAGGTGATCaggtcccactgggcacacactggttgaatcaatgttgtatcaatgtaatttgtcaacgtattgtgacatgaaatcaatgtggaaaatacaatggatttgaaaaaagtaa

Function

symbol description
srgn Is expressed in neutrophil. Orthologous to human SRGN (serglycin).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956252.1 True 1378 mRNA 0.39 3 35473620 35479099

Neighbor

gene id symbol gene type direction distance location
kifbp kif1bp coding upstream 4680 35465635 ~ 35468940 (+)
LOC110499400 LOC100194728 coding upstream 27079 35438980 ~ 35446541 (+)
LOC110499398 m4a15 coding upstream 55688 35410239 ~ 35417932 (+)
LOC110499396 LOC106589821 coding upstream 89053 35381609 ~ 35384567 (+)
LOC110499394 LOC106589820 coding upstream 99593 35338449 ~ 35374027 (+)
LOC110499405 LOC106589824 coding downstream 13515 35492614 ~ 35498474 (+)
LOC110499406 LOC106589826 coding downstream 21680 35500779 ~ 35508659 (+)
LOC110499539 LOC105890937 coding downstream 32128 35511227 ~ 35522297 (+)
LOC110499407 LOC106589825 coding downstream 57833 35536932 ~ 35558759 (+)
LOC110499410 LOC106589828 coding downstream 92155 35571254 ~ 35605240 (+)
G1689218 NA non-coding upstream 53365 35418048 ~ 35420255 (+)
G1689237 NA non-coding upstream 56894 35415812 ~ 35416726 (+)
G1689229 NA non-coding upstream 68006 35400704 ~ 35405614 (+)
G1689215 NA non-coding upstream 85784 35387536 ~ 35387836 (+)
G1689214 NA non-coding upstream 87023 35386265 ~ 35386597 (+)
G1689303 NA non-coding downstream 71546 35550645 ~ 35551201 (+)
G1689337 NA non-coding downstream 138351 35617450 ~ 35617666 (+)
G1689342 NA non-coding downstream 163818 35642917 ~ 35643832 (+)
G1689299 NA non-coding downstream 165705 35644804 ~ 35645180 (+)
G1689295 NA non-coding downstream 166163 35645262 ~ 35645588 (+)
G1687675 NA other upstream 1147366 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2288344 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 2811972 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 5897062 29572397 ~ 29588171 (+)
G1689347 NA other downstream 202268 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 222121 35701200 ~ 35702156 (+)
G1689671 NA other downstream 402479 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 641517 36120616 ~ 36125390 (+)
G1690092 NA other downstream 785561 36264660 ~ 36264981 (+)

Expression


Co-expression Network