Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499438 |
| gene name | LOC106589865 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 36891846 ~ 36896982 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| chromobox protein homolog 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021576581.2 | False | 3837 | mRNA | 0.50 | 5 | 36891846 | 36896982 |
| TU1933942 | True | 1360 | TUCP | 0.59 | 5 | 36893547 | 36896206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499436 | LOC106589862 | coding | downstream | 299082 | 36583534 ~ 36592764 (-) |
| LOC110499433 | LOC106589859 | coding | downstream | 504174 | 36344254 ~ 36387672 (-) |
| LOC110499540 | LOC106589857 | coding | downstream | 555394 | 36258019 ~ 36336452 (-) |
| LOC110499429 | LOC106589855 | coding | downstream | 695396 | 36181083 ~ 36196450 (-) |
| LOC110499427 | LOC106612293 | coding | downstream | 766409 | 36120507 ~ 36125437 (-) |
| LOC110499441 | LOC106589863 | coding | upstream | 23196 | 36920178 ~ 36935086 (-) |
| LOC118942469 | NA | coding | upstream | 49284 | 36946266 ~ 36946381 (-) |
| LOC110499443 | rbfox3 | coding | upstream | 158971 | 37055953 ~ 37197149 (-) |
| LOC110499449 | LOC106589899 | coding | upstream | 1319895 | 38216877 ~ 38320114 (-) |
| rtst6galnac | rtst6galnac | coding | upstream | 1446008 | 38342990 ~ 38358741 (-) |
| G1690738 | nogg3 | non-coding | downstream | 43271 | 36847297 ~ 36848575 (-) |
| G1690727 | NA | non-coding | downstream | 54228 | 36836972 ~ 36837618 (-) |
| G1690710 | NA | non-coding | downstream | 64154 | 36827439 ~ 36827692 (-) |
| G1690695 | NA | non-coding | downstream | 77934 | 36811931 ~ 36813912 (-) |
| G1690694 | NA | non-coding | downstream | 87737 | 36803821 ~ 36804109 (-) |
| G1690859 | NA | non-coding | upstream | 47539 | 36944521 ~ 36944875 (-) |
| G1690877 | NA | non-coding | upstream | 80015 | 36976997 ~ 36977343 (-) |
| G1690880 | LOC106589867 | non-coding | upstream | 85547 | 36982529 ~ 36982995 (-) |
| G1690881 | NA | non-coding | upstream | 86686 | 36983668 ~ 36983905 (-) |
| G1690882 | NA | non-coding | upstream | 87068 | 36984050 ~ 36984278 (-) |
| G1690696 | NA | other | downstream | 81703 | 36809699 ~ 36810143 (-) |
| G1690649 | NA | other | downstream | 188405 | 36702546 ~ 36703441 (-) |
| G1690367 | NA | other | downstream | 471246 | 36418789 ~ 36420600 (-) |
| LOC110499416 | dnah17 | other | downstream | 1025062 | 35864651 ~ 35951415 (-) |
| G1691432 | NA | other | upstream | 341845 | 37238827 ~ 37239310 (-) |
| G1692288 | cnrg | other | upstream | 1585913 | 38478761 ~ 38485362 (-) |
| oxld1 | LOC106589895 | other | upstream | 1592568 | 38489508 ~ 38492111 (-) |
| G1692405 | NA | other | upstream | 1670398 | 38567380 ~ 38568189 (-) |
| LOC110499457 | LOC106589889 | other | upstream | 2106818 | 38982955 ~ 39006598 (-) |
