Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118942469 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 36946266 ~ 36946381 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038406.1 | True | 116 | mRNA | 0.41 | 1 | 36946266 | 36946381 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499441 | LOC106589863 | coding | downstream | 11180 | 36920178 ~ 36935086 (-) |
| LOC110499438 | LOC106589865 | coding | downstream | 49284 | 36891846 ~ 36896982 (-) |
| LOC110499436 | LOC106589862 | coding | downstream | 353502 | 36583534 ~ 36592764 (-) |
| LOC110499433 | LOC106589859 | coding | downstream | 558594 | 36344254 ~ 36387672 (-) |
| LOC110499540 | LOC106589857 | coding | downstream | 609814 | 36258019 ~ 36336452 (-) |
| LOC110499443 | rbfox3 | coding | upstream | 109572 | 37055953 ~ 37197149 (-) |
| LOC110499449 | LOC106589899 | coding | upstream | 1270496 | 38216877 ~ 38320114 (-) |
| rtst6galnac | rtst6galnac | coding | upstream | 1396609 | 38342990 ~ 38358741 (-) |
| LOC110499450 | LOC106589897 | coding | upstream | 1456438 | 38402819 ~ 38412446 (-) |
| LOC110499543 | LOC106589896 | coding | upstream | 1498907 | 38445288 ~ 38478951 (-) |
| G1690859 | NA | non-coding | downstream | 1391 | 36944521 ~ 36944875 (-) |
| G1690831 | NA | non-coding | downstream | 21859 | 36888058 ~ 36924407 (-) |
| G1690738 | nogg3 | non-coding | downstream | 97691 | 36847297 ~ 36848575 (-) |
| G1690727 | NA | non-coding | downstream | 108648 | 36836972 ~ 36837618 (-) |
| G1690710 | NA | non-coding | downstream | 118574 | 36827439 ~ 36827692 (-) |
| G1690877 | NA | non-coding | upstream | 30616 | 36976997 ~ 36977343 (-) |
| G1690880 | LOC106589867 | non-coding | upstream | 36148 | 36982529 ~ 36982995 (-) |
| G1690881 | NA | non-coding | upstream | 37287 | 36983668 ~ 36983905 (-) |
| G1690882 | NA | non-coding | upstream | 37669 | 36984050 ~ 36984278 (-) |
| G1690883 | NA | non-coding | upstream | 40657 | 36987038 ~ 36987339 (-) |
| G1690696 | NA | other | downstream | 136123 | 36809699 ~ 36810143 (-) |
| G1690649 | NA | other | downstream | 242825 | 36702546 ~ 36703441 (-) |
| G1690367 | NA | other | downstream | 525666 | 36418789 ~ 36420600 (-) |
| LOC110499427 | LOC106612293 | other | downstream | 820868 | 36120507 ~ 36125437 (-) |
| G1691432 | NA | other | upstream | 292446 | 37238827 ~ 37239310 (-) |
| G1692288 | cnrg | other | upstream | 1536514 | 38478761 ~ 38485362 (-) |
| oxld1 | LOC106589895 | other | upstream | 1543169 | 38489508 ~ 38492111 (-) |
| G1692405 | NA | other | upstream | 1620999 | 38567380 ~ 38568189 (-) |
| LOC110499457 | LOC106589889 | other | upstream | 2057419 | 38982955 ~ 39006598 (-) |
