rtst6galnac (rtst6galnac)


Basic Information

Item Value
gene id rtst6galnac
gene name rtst6galnac
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38342990 ~ 38358741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124217.1
CTCCTACTATGCAGATAGATAACTGTCACTAAAGAAGACTCGTCACAGactgTCATGTGGTAAGAGAGGCCCCAGAGTAGTGTGCACCTCTGTGCACTCGTTTTACAGTCAACTCCAGCCCTCGTCTCTTTCCTCGTTGCTCCCCTGAAAACCCGAACAACCTCCTCAGAAGGACATTGGTGACTCCCCTCTACTCCCCACATTCCTCCTCATTGGAGGGTAGAGGGCACACACACAGCCGGCTGCTCAGGCTCAGGTCCACGATGACGAGCATGGGGCTCCAGAGGAGGCTATGGCTGTGCTTCCTGGGTGTCAGCTTCCTGCCAGTCATCTATATCATCTATTTGAACCTTGAGATCACCTGGCGCATGGACATCCTGAACCTGACACAATTCCCTGGCATCTGGTACACACAGGAACCCAACAGGTTACATGACCCTGAAGAACCTCTTGTTGTCAATACGCTGTCAGATAATAGTAGTATCGCACCACCAACACCTTTAAGTTTAAAGGTGAAGTCCACATCCCCTGCCAGAGTCAGACCGTCAACAGAACCTGGAGCCAGGACTACCAAGGGCTCTGATGTTAAAGGTGCTCTCCTCAAGTCTGCCAAACCAACAGAGCCACCCTTCATTGGCGACAGCTACTACAGTGAAGATGCCCCACCTCAAACAGACTGTCCAGACAGTATTCGGAGCAGGGTGTCCCAGACAGACTTTGGGGTACGGTATCTGGGCAGGATCCCTGTGCTTCAGTGGGCCAAGCATGCCACTCCAGAACAGTACCAGCGCCTCCGATTGTATCCTGGGACTCATGGCTGGGCAAACCTCGACTTTAACACTCTGGTGTCGACCCTGTCTGTTCTCAACACGTCAGCCAACTGGCACATGTTTGATGACTGGGATCGTCGTAGCAACGGCTCACGGTGTGTCCGCTGTGCTGTCGTGGGCAACGGAGGGATTCTGAATGAGTCAAAGAAAGGCCATGAGATTGACCAGCATGACTACGTATTCAGGACCAACGGAGCTGTCATTAAAGGCTTTGAGCAGGATGTGGGCTCCAGAACATCCTTCTACACGTTCTCCACCAACACACTCCGTAACTCCATGAGGAGCTACGCCGGAGCGGGCTACAGAGGACCACCGCTCTCTGAGGAGACACGCTATGTCTTCCTGCCAGACCATGACAGGGATTATCTGCTGATGAAAGCAGCTGCCACACACACTCCAGTAGAGAGAGGACCAGAAAGGAGCAAAACACCTCCCACATACTTTGGAGGAAATGTGACCGTAGAAAAGTTGAAGATGTACCATCCAGATTTCATACGCTACATCAGAAACagGTTCCTCCGGGCCCACGCCATGCAGACCAAATACAAGGACATCTACCGTCCATCAACAGGTGCTGTGATGCTGCTGGCTGCGATACACACCTGTGACCAGGTGAGCGCGTATGGCTTCATGACTCCAGACTATGTGAAATACTCTGACCACTACTTTGACCACCAATATCACCCAGTGGGTTTCTTCATTAACCATGACATGAGGCTGGAGATGACACTGTGGCAACAACTCCACCGTGCAGGCCTCATCACTCTCTACATGCGCCAGTGAACTCAGGAACTAACTCACTCAAGGTTGCTACGGCAACGACCACCTCCCGTAGGATTAAAAACTAGTCaaactgtatatttatatattattgaacaaaaaaatataaattcaacATGGTGTtggttttatgagctgaaataaaagatcccagaaatgttccgtatgcac

Function

NR:

description
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0097503 sialylation biological_process
GO:0030173 integral component of Golgi membrane cellular_component
GO:0008373 sialyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124217.1 True 1781 mRNA 0.51 10 38342990 38358741

Neighbor

gene id symbol gene type direction distance location
LOC110499449 LOC106589899 coding downstream 22876 38216877 ~ 38320114 (-)
LOC110499443 rbfox3 coding downstream 1145841 37055953 ~ 37197149 (-)
LOC118942469 NA coding downstream 1396609 36946266 ~ 36946381 (-)
LOC110499441 LOC106589863 coding downstream 1407904 36920178 ~ 36935086 (-)
LOC110499438 LOC106589865 coding downstream 1446008 36891846 ~ 36896982 (-)
LOC110499450 LOC106589897 coding upstream 44078 38402819 ~ 38412446 (-)
LOC110499543 LOC106589896 coding upstream 86547 38445288 ~ 38478951 (-)
LOC110499454 cnrg coding upstream 124235 38482976 ~ 38485410 (-)
oxld1 LOC106589895 coding upstream 130767 38489508 ~ 38492111 (-)
LOC110499451 LOC106589894 coding upstream 156861 38515602 ~ 38527974 (-)
G1692279 NA non-coding downstream 1927 38340605 ~ 38341063 (-)
G1692169 NA non-coding downstream 17651 38325051 ~ 38325339 (-)
G1692132 NA non-coding downstream 50559 38264929 ~ 38292431 (-)
G1692119 NA non-coding downstream 113625 38229110 ~ 38229365 (-)
G1692118 NA non-coding downstream 114381 38228354 ~ 38228609 (-)
G1692295 NA non-coding upstream 15709 38374450 ~ 38374743 (-)
G1692301 NA non-coding upstream 26590 38385331 ~ 38385871 (-)
G1692288 cnrg non-coding upstream 120020 38478761 ~ 38485362 (-)
G1692340 NA non-coding upstream 128008 38486749 ~ 38487028 (-)
G1692345 NA non-coding upstream 141218 38499959 ~ 38500290 (-)
G1691432 NA other downstream 1103680 37238827 ~ 37239310 (-)
G1690696 NA other downstream 1532847 36809699 ~ 36810143 (-)
G1690649 NA other downstream 1639549 36702546 ~ 36703441 (-)
G1690367 NA other downstream 1922390 36418789 ~ 36420600 (-)
G1692405 NA other upstream 208639 38567380 ~ 38568189 (-)
LOC110499457 LOC106589889 other upstream 645059 38982955 ~ 39006598 (-)
LOC110499545 hid1 other upstream 715337 39070043 ~ 39101170 (-)

Expression


Co-expression Network