oxld1 (LOC106589895)


Basic Information

Item Value
gene id oxld1
gene name LOC106589895
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38489508 ~ 38492111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576589.2
ACTGTGTttcctttcagccaatcagcaacctTGCTGACAGCCACTGACGGTCATAGTTCATTCCAACATGGCGGAATTTCACGGCTGGCATGCGAGCTAGTTAGCCAAGTAGCTGAAACACTTGGCTGGAGGGAAATAGATTTGTCGATTGTACTCTACGTAGGAAATGATGTATTCAGATATGTAGCAACGTATACATCAGAAAGATGTTTCGTTTGAGAGGAAATATCATGGGATCATCGTTGTCTTTACAGAAGCTGTGTGTCCTGTACCTGGGAGGGCGGATCTCTCAACAGTTTCATCTGCCGTGGGTAAAACCTTACCTCAGActaggaactgtccgtagagtcACAGCTGAAGTTGGATCAACCACTCCAACTCCTCCTACTCTGAATAGCCCAGACAGTAGCCTTGAGTCTAGCTCTGGCCACTGTAGCTCTGACCCCCCTCCTGCCAAGGCCGTTGGCCCTCCACTCGCCCCCACCCACTGTTGTATGAGCGGTTGCCATAACTGTGTGTGGATCGAACACGCAGAGCAGCTCCTAGCCTACTACCGTGATGGAGGGTTTGGGAAAGAGAGTGCCCTGGCTGCTATTGAGGAGAACGTATCGGATGAGAACCTGAAAGCCTTCCTGAAGATGGAGATCAGGATGATGACGAAGAAGTAGACTCTTTATTGTCTTTGTGTGGCAGAGAGGGAATGGGGACATTGAGGGCCTTTTGACACTGTATGCACTTTAAACCACTCCCTCGTATTTTAATACTGGTATGCATTTTATCCTACGTGTCTATCAAACTGTCATTTCACTTAGTCATGGCCATTTCAACTAGTTTTTGTCATCGCATAATCTTGCATATTCTAACCTAGTCTATAGTTTTTTGCATGAGTGTATACATGTATAATTTCTCATTTCATTCATGCATAGATATAGCCTAGTGCCATTCAAGCATACTTTGTTGAGGCATTCAATAAGGTAGGCCTAATGTTTTCAATGTTCACATAATCTCAATACATTTTGATGTTTAATTTATTTATGCCGTCTGACAGTGTTACTTTCTGCTATGCTGTGACAAATGAACCTGAAAAATACATTTCCCTGACACTTGAAATAGAATACGCACAATTATGTTTGGATTTAAACATTTTTAGGTTTATGGGTTGATTTTATATCAGTTGGTGGTGGATGAGTTGTtcttatttattatttaaatataaATTGTAAGTGTAGGTTGACGATGGGCAACATTTGTTTTGAAATAAATCTTGTACTTGTATGACTGAA
>TU1935564
CGGAATTTCACGGCTGGCATGCGAGCTAGTTAGCCAAGTAGCTGAAACACTTGGCTGGAGGGAAATAGATTTGTCGATTGTACTCTACGTAGGAAATGATGTATTCAGATATGTAGCAACGTATACATCAGAAAGATGTTTCGTTTGAGAGGAAATATCATGGGATCATCGTTGTCTTTACAGAAGCTGTGTGTCCTGTACCTGGGAGGGCGGATCTCTCAACAGTTTCATCTGCCGTGGGTAAAACCTTACCTCAGActaggaactgtccgtagagtcACAGCTGAAGTTGGATCAACCACTCCAACTCCTCCTACTCTGAATAGCCCAGACAGTAGCCTTGAGTCTAGCTCTGGCCACTGTAGCTCTGACCCCCCTCCTGCCAAGGCCGTTGGCCCTCCACTCGCCCCCACCCACTGTTGTATGAGCGGTTGCCATAACTGTGTGTGGATCGAACACGCAGAGCAGCTCCTAGCCTACTACCGTGATGGAGGGTTTGGGAAAGAGAGTGCCCTGGCTGCTATTGAGGAGAACGTATCGGATGAGAACCTGAAAGCCTTCCTGAAGATGGAGATCAGGATGATGACGAAGAAGTAGACTCTTTATTGTCTTTGTGTGGCAGAGAGGGAATGGGGACATTGAGGGCCTTTTGACACTGTATGCACTTTAAACCACTCCCTCGTATTTTAATACTGGTATGCATTTTATCCTACGTGTCTATCAAACTGTCATTTCACTTAGTCATGGCCATTTCAACTAGTTTTTGTCATCGCATAATCTTGCATATTCTAACCTAGTCTATAGTTTTTTGCATGAGTGTATACATGTATAATTTCTCATTTCATTCATGCATAGATATAGCCTAGTGCCATTCAAGCATACTTTGTTGAGGCATTCAATAAGGTAGGCCTAATGTTTTCAATGTTCACATAATCTCAATACATTTTGATGTTTAATTTATTTATGCCGTCTGACAGTGTTACTTTCTGCTATGCTGTGACAAATGAACCTGAAAAATACATTTCCCTGACACTTGAAATAGAATACGCACAATTATGTTTGGATTTAAACATTTTTAGGTTTATGGGTTGATTTTATATCAGTTGGTGGTGGATGAGTTGTtcttatttattatttaaatataaATTGTAAGTGTAGGTTGACGATGGG

Function

NR:

description
oxidoreductase-like domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576589.2 False 1283 mRNA 0.42 2 38489508 38492111
TU1935564 True 1170 TUCP 0.42 2 38489550 38492040

Neighbor

gene id symbol gene type direction distance location
LOC110499454 cnrg coding downstream 4098 38482976 ~ 38485410 (-)
LOC110499543 LOC106589896 coding downstream 10557 38445288 ~ 38478951 (-)
LOC110499450 LOC106589897 coding downstream 77062 38402819 ~ 38412446 (-)
rtst6galnac rtst6galnac coding downstream 130767 38342990 ~ 38358741 (-)
LOC110499449 LOC106589899 coding downstream 169394 38216877 ~ 38320114 (-)
LOC110499451 LOC106589894 coding upstream 23491 38515602 ~ 38527974 (-)
LOC110499599 NA coding upstream 45728 38537839 ~ 38545503 (-)
kcnj2a LOC106589892 coding upstream 261646 38753757 ~ 38762601 (-)
LOC110499456 LOC106589891 coding upstream 289916 38782027 ~ 38801044 (-)
tvp23b LOC106589890 coding upstream 473477 38965588 ~ 38972051 (-)
G1692340 NA non-coding downstream 2480 38486749 ~ 38487028 (-)
G1692288 cnrg non-coding downstream 4146 38478761 ~ 38485362 (-)
G1692301 NA non-coding downstream 103637 38385331 ~ 38385871 (-)
G1692295 NA non-coding downstream 114765 38374450 ~ 38374743 (-)
G1692279 NA non-coding downstream 148445 38340605 ~ 38341063 (-)
G1692345 NA non-coding upstream 7848 38499959 ~ 38500290 (-)
G1692348 NA non-coding upstream 10245 38502356 ~ 38502732 (-)
G1692371 NA non-coding upstream 43254 38535365 ~ 38535565 (-)
G1692383 NA non-coding upstream 54908 38547019 ~ 38547248 (-)
G1692388 NA non-coding upstream 59347 38551458 ~ 38551761 (-)
G1691432 NA other downstream 1250198 37238827 ~ 37239310 (-)
LOC110499438 LOC106589865 other downstream 1593302 36891846 ~ 36896982 (-)
G1690696 NA other downstream 1679365 36809699 ~ 36810143 (-)
G1690649 NA other downstream 1786067 36702546 ~ 36703441 (-)
G1692405 NA other upstream 75269 38567380 ~ 38568189 (-)
LOC110499457 LOC106589889 other upstream 511689 38982955 ~ 39006598 (-)
LOC110499545 hid1 other upstream 581967 39070043 ~ 39101170 (-)
G1693092 NA other upstream 772190 39264301 ~ 39264691 (-)
G1693393 NA other upstream 971319 39463430 ~ 39490078 (-)

Expression


Co-expression Network