LOC118942016


Basic Information

Item Value
gene id LOC118942016
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38639595 ~ 38640649 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955563.1
ATGGCTGATGCTCCTGAGCCTCTGCTGTTATGGAAAGCCCAGACCATCACCAGACCCCCTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGACCCCCTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGACCCCCTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGATCTACTGCATTCAACCACCATCCGAGAGCCCAGACCATCACCAGACCCCCTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGATCTACTGCATTCAACCACCATCCGAGAGCCCAGACCATCACCAGACCTACTGCGTTCAACCACCATCCGAGAGCCCGGACCATCACCAGACCCCTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGACCTACTGCGTTCAACCACCATCCAAGAGCCCAGACCATCACCAGACCCCTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGACCCCCTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGACATACTGCGTTCAACCACCATCCAAGAGCCCAGACCATTACCAGATATACTGCATTCAACCACCATCCGAGAGCCCAGACCATCACCAGACCTACTGCGTTCAACCACCATCCGAGAGCTCAGACCATTACCAGACCTACTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGACCTACTGCGTTCAACCACCATCCGAGAGCCCAGACCATTACCAGACCTACTGCGTTCCACAGTAG

Function

NR:

description
PREDICTED: glutenin, high molecular weight subunit DY10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955563.1 True 792 mRNA 0.56 2 38639595 38640649

Neighbor

gene id symbol gene type direction distance location
LOC110499544 mkk6c coding upstream 823 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 45290 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 435625 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 558325 38075973 ~ 38081270 (+)
LOC110499442 LOC106589867 coding upstream 1654035 36965177 ~ 36985560 (+)
LOC110499463 LOC106589886 coding downstream 416387 39057036 ~ 39068138 (+)
plaub plau coding downstream 470241 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 483429 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 503307 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 776220 39416869 ~ 39418951 (+)
G1692440 NA non-coding upstream 36110 38603092 ~ 38603485 (+)
G1692423 NA non-coding upstream 60540 38578816 ~ 38579055 (+)
G1692421 NA non-coding upstream 61155 38578192 ~ 38578440 (+)
G1692404 NA non-coding upstream 71415 38567872 ~ 38568180 (+)
G1692428 NA non-coding downstream 2874 38643523 ~ 38645620 (+)
G1692456 NA non-coding downstream 6248 38646897 ~ 38647109 (+)
G1692459 NA non-coding downstream 10441 38651090 ~ 38651301 (+)
G1692460 NA non-coding downstream 11758 38652407 ~ 38652646 (+)
G1692462 NA non-coding downstream 13423 38654072 ~ 38654310 (+)
G1692406 NA other upstream 70149 38568269 ~ 38569446 (+)
G1691992 NA other upstream 411044 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 416860 38222505 ~ 38222735 (+)
G1691267 NA other upstream 830534 37804543 ~ 37809061 (+)
G1691189 NA other upstream 985531 37650626 ~ 37654064 (+)
G1692568 NA other downstream 70302 38710951 ~ 38712291 (+)
G1692702 NA other downstream 199285 38839934 ~ 38840271 (+)
G1693184 NA other downstream 715696 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1240700 39881349 ~ 39881843 (+)
G1693700 NA other downstream 1241309 39881958 ~ 39882625 (+)

Expression


Co-expression Network