comtd1 (cmtd1)


Basic Information

Item Value
gene id comtd1
gene name cmtd1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39688077 ~ 39696553 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160639.1
AGATGAACACGGGGGTAATAGTAGGGTTGACCTGGATTTTCTGCGAAACAGAATCAACTGGAGGGTGACCGTGTCATTACCCTCGTAAGATATCTGAAATGACATCAAAGGGCAAAAGAAGATCCACATTTTCCATGGACATCTTCAAGAGTCACTCTGGGGCAAAAGATAACCCTTTGATGCAGTATGTCCTCAATCATTCAATGAGGGAGCATCCGGCCCTGAAAAAACTCAGACTGAGGACTATGGATGATTCCTGGAACTTCATCATGGTTGCCGCTGAGCAGTCTCAGCTGATGGCTAACCTGGCAAGACTCATCAAAACCAAGAAAGCTATAGAAATCGGAGTATACACAGGGTACAACACTCTGAGCATAGCGCTGGTTCTGCCAGACGACGGGAAGATGGTGGCCTGTGACATCAAAGACGAATACCCCAACATCGGCAAACCCTTCTGGAAAGAGGCTGGAGTGGAACATAAAATAGATCTACGCATCCAGCCGGCATTGAAAACTCTAGATGACCTCTTGGCCAATGGCGAGGCCGAGACATTTGACTTCGTCTTCATCGATGCAGACAAAGCAAACTATGACAACTACTATGAAAAATCCCTCCAGCTAGTGAGGAAAGGAGGCATTATTGCCATTGATAATgttctgtggagtgggaaggtggtGAACCCTGCAGCTGATGACATTGACACCCAGGCCATTGACAAGCTGAACAAGAAGTTGTACCGGGATGTCAGGATCAACATCAGCATGCTCACCGTGGGAGACGGCGTGACACTGGCCTTCAAACTCTAACACTATGTAGGAGACAGGTCTTAAAACTATAGTACTAAATGGAAGATTGGCCAACACTGGTCTGTACTGTGGTAAACCGTAGTACCCAATTACTGAGAAGTAGCTTTACATTACGATAATCAGATAGTACTTGCCAAGTGCTGACTTTTAAAATGGTTGTTTATAGGTCATTAAATCCACGTGCGTAATGCTGCCCTTTAATATATGTGACCTGAAAAGGTTTAAATGAAAGAACTAGGACTGTCAGAGTTAATCAGGTAACTTtgtgtgcattttttttttttaatatattgtCTGAAGGCATTCAAAAATATACTGAAAACAAGTCGAGTGTCTGCTTTCTCAATTTACATCATTTTGCCAACTGTTACTTTAGACAAAATTAAGATGTCaatattcttgtttttttttaatgaaaaatcTTAAATCGCACCTTAATTTGAGCAAATTCTGAAGTTGTGATAATTCACAGCAAACCCTGCGATTAAATAAAACGTGATGGTCCTAGAAAGGACCAAAgtaatg
>XM_021575345.2
ATGTCTTTTCACAGTGTGTCCAGAGAAGCATTGATCGGCTCGGCTACACTTGGAGTTGTCTTTGTGGCTGGTTATTACATTGGCAAAAGAAGATCCACATTTTCCATGGACATCTTCAAGAGTCACTCTGGGGCAAAAGATAACCCTTTGATGCAGTATGTCCTCAATCATTCAATGAGGGAGCATCCGGCCCTGAAAAAACTCAGACTGAGGACTATGGATGATTCCTGGAACTTCATCATGGTTGCCGCTGAGCAGTCTCAGCTGATGGCTAACCTGGCAAGACTCATCAAAACCAAGAAAGCTATAGAAATCGGAGTATACACAGGGTACAACACTCTGAGCATAGCGCTGGTTCTGCCAGACGACGGGAAGATGGTGGCCTGTGACATCAAAGACGAATACCCCAACATCGGCAAACCCTTCTGGAAAGAGGCTGGAGTGGAACATAAAATAGATCTACGCATCCAGCCGGCATTGAAAACTCTAGATGACCTCTTGGCCAATGGCGAGGCCGAGACATTTGACTTCGTCTTCATCGATGCAGACAAAGCAAACTATGACAACTACTATGAAAAATCCCTCCAGCTAGTGAGGAAAGGAGGCATTATTGCCATTGATAATgttctgtggagtgggaaggtggtGAACCCTGCAGCTGATGACATTGACACCCAGGCCATTGACAAGCTGAACAAGAAGTTGTACCGGGATGTCAGGATCAACATCAGCATGCTCACCGTGGGAGACGGCGTGACACTGGCCTTCAAACTCTAACACTATGTAGGAGACAGGTCTTAAAACTATAGTACTAAATGGAAGATTGGCCAACACTGGTCTGTACTGTGGTAAACCGTAGTACCCAATTACTGAGAAGTAGCTTTACATTACGATAATCAGATAGTACTTGCCAAGTGCTGACTTTTAAAATGGTTGTTTATAGGTCATTAAATCCACGTGCGTAATGCTGCCCTTTAATATATGTGACCTGAAAAGGTTTAAATGAAAGAACTAGGACTGTCAGAGTTAATCAGGTAACTTtgtgtgcattttttttttttaatatattgtCTGAAGGCATTCAAAAATATACTGAAAACAAGTCGAGTGTCTGCTTTCTCAATTTACATCATTTTGCCAACTGTTACTTTAGACAAAATTAAGATGTCaatattcttgtttttttttaatgaaaaatcTTAAATCGCACCTTAATTTGAGCAAATTCTGAAGTTGTGATAATTCACAGCAAACCCTGCGATTAAATAAAACGTGATGGTCCTAGAAAGGACCAAAgtaa
>XM_021575348.2
TAAGCGCAATGTGAATGTATTGTCCGTTCATGTGTATGCATTATATTTAGGGTGCGCCACTATATTACAGCTTCGCGGTTACGTATAGCAAACAAGGAAAGAACTTGTTACACGGCAAAAGAAGATCCACATTTTCCATGGACATCTTCAAGAGTCACTCTGGGGCAAAAGATAACCCTTTGATGCAGTATGTCCTCAATCATTCAATGAGGGAGCATCCGGCCCTGAAAAAACTCAGACTGAGGACTATGGATGATTCCTGGAACTTCATCATGGTTGCCGCTGAGCAGTCTCAGCTGATGGCTAACCTGGCAAGACTCATCAAAACCAAGAAAGCTATAGAAATCGGAGTATACACAGGGTACAACACTCTGAGCATAGCGCTGGTTCTGCCAGACGACGGGAAGATGGTGGCCTGTGACATCAAAGACGAATACCCCAACATCGGCAAACCCTTCTGGAAAGAGGCTGGAGTGGAACATAAAATAGATCTACGCATCCAGCCGGCATTGAAAACTCTAGATGACCTCTTGGCCAATGGCGAGGCCGAGACATTTGACTTCGTCTTCATCGATGCAGACAAAGCAAACTATGACAACTACTATGAAAAATCCCTCCAGCTAGTGAGGAAAGGAGGCATTATTGCCATTGATAATgttctgtggagtgggaaggtggtGAACCCTGCAGCTGATGACATTGACACCCAGGCCATTGACAAGCTGAACAAGAAGTTGTACCGGGATGTCAGGATCAACATCAGCATGCTCACCGTGGGAGACGGCGTGACACTGGCCTTCAAACTCTAACACTATGTAGGAGACAGGTCTTAAAACTATAGTACTAAATGGAAGATTGGCCAACACTGGTCTGTACTGTGGTAAACCGTAGTACCCAATTACTGAGAAGTAGCTTTACATTACGATAATCAGATAGTACTTGCCAAGTGCTGACTTTTAAAATGGTTGTTTATAGGTCATTAAATCCACGTGCGTAATGCTGCCCTTTAATATATGTGACCTGAAAAGGTTTAAATGAAAGAACTAGGACTGTCAGAGTTAATCAGGTAACTTtgtgtgcattttttttttttaatatattgtCTGAAGGCATTCAAAAATATACTGAAAACAAGTCGAGTGTCTGCTTTCTCAATTTACATCATTTTGCCAACTGTTACTTTAGACAAAATTAAGATGTCaatattcttgtttttttttaatgaaaaatcTTAAATCGCACCTTAATTTGAGCAAATTCTGAAGTTGTGATAATTCACAGCAAACCCTGCGATTAAATAAAACGTGATGGTCCTAGAAAGGACCAAAgtaa
>XM_021575347.2
AACATAACTGGCACCACGCAGTTTCATAGCTCGTCGATTTAATATCTTTCTACGCGTGTGTCCAGAGAAGCATTGATCGGCTCGGCTACACTTGGAGTTGTCTTTGTGGCTGGTTATTACATTGGCAAAAGAAGATCCACATTTTCCATGGACATCTTCAAGAGTCACTCTGGGGCAAAAGATAACCCTTTGATGCAGTATGTCCTCAATCATTCAATGAGGGAGCATCCGGCCCTGAAAAAACTCAGACTGAGGACTATGGATGATTCCTGGAACTTCATCATGGTTGCCGCTGAGCAGTCTCAGCTGATGGCTAACCTGGCAAGACTCATCAAAACCAAGAAAGCTATAGAAATCGGAGTATACACAGGGTACAACACTCTGAGCATAGCGCTGGTTCTGCCAGACGACGGGAAGATGGTGGCCTGTGACATCAAAGACGAATACCCCAACATCGGCAAACCCTTCTGGAAAGAGGCTGGAGTGGAACATAAAATAGATCTACGCATCCAGCCGGCATTGAAAACTCTAGATGACCTCTTGGCCAATGGCGAGGCCGAGACATTTGACTTCGTCTTCATCGATGCAGACAAAGCAAACTATGACAACTACTATGAAAAATCCCTCCAGCTAGTGAGGAAAGGAGGCATTATTGCCATTGATAATgttctgtggagtgggaaggtggtGAACCCTGCAGCTGATGACATTGACACCCAGGCCATTGACAAGCTGAACAAGAAGTTGTACCGGGATGTCAGGATCAACATCAGCATGCTCACCGTGGGAGACGGCGTGACACTGGCCTTCAAACTCTAACACTATGTAGGAGACAGGTCTTAAAACTATAGTACTAAATGGAAGATTGGCCAACACTGGTCTGTACTGTGGTAAACCGTAGTACCCAATTACTGAGAAGTAGCTTTACATTACGATAATCAGATAGTACTTGCCAAGTGCTGACTTTTAAAATGGTTGTTTATAGGTCATTAAATCCACGTGCGTAATGCTGCCCTTTAATATATGTGACCTGAAAAGGTTTAAATGAAAGAACTAGGACTGTCAGAGTTAATCAGGTAACTTtgtgtgcattttttttttttaatatattgtCTGAAGGCATTCAAAAATATACTGAAAACAAGTCGAGTGTCTGCTTTCTCAATTTACATCATTTTGCCAACTGTTACTTTAGACAAAATTAAGATGTCaatattcttgtttttttttaatgaaaaatcTTAAATCGCACCTTAATTTGAGCAAATTCTGAAGTTGTGATAATTCACAGCAAACCCTGCGATTAAATAAAACGTGATGGTCCTAGAAAGGACCAAAgtaa
>XM_021575346.2
GTTAAAATAATTATTCATGAATCAGGGATCAGagaccctccctccatccctccctgttcAGAGGCCATTTTTATACAGTGAATCACAAAACGGTACAACATAACTGGCACCACGCAGTTTCATAGCTCGTCGATTTAATATCTTTCTACGCGGCAAAAGAAGATCCACATTTTCCATGGACATCTTCAAGAGTCACTCTGGGGCAAAAGATAACCCTTTGATGCAGTATGTCCTCAATCATTCAATGAGGGAGCATCCGGCCCTGAAAAAACTCAGACTGAGGACTATGGATGATTCCTGGAACTTCATCATGGTTGCCGCTGAGCAGTCTCAGCTGATGGCTAACCTGGCAAGACTCATCAAAACCAAGAAAGCTATAGAAATCGGAGTATACACAGGGTACAACACTCTGAGCATAGCGCTGGTTCTGCCAGACGACGGGAAGATGGTGGCCTGTGACATCAAAGACGAATACCCCAACATCGGCAAACCCTTCTGGAAAGAGGCTGGAGTGGAACATAAAATAGATCTACGCATCCAGCCGGCATTGAAAACTCTAGATGACCTCTTGGCCAATGGCGAGGCCGAGACATTTGACTTCGTCTTCATCGATGCAGACAAAGCAAACTATGACAACTACTATGAAAAATCCCTCCAGCTAGTGAGGAAAGGAGGCATTATTGCCATTGATAATgttctgtggagtgggaaggtggtGAACCCTGCAGCTGATGACATTGACACCCAGGCCATTGACAAGCTGAACAAGAAGTTGTACCGGGATGTCAGGATCAACATCAGCATGCTCACCGTGGGAGACGGCGTGACACTGGCCTTCAAACTCTAACACTATGTAGGAGACAGGTCTTAAAACTATAGTACTAAATGGAAGATTGGCCAACACTGGTCTGTACTGTGGTAAACCGTAGTACCCAATTACTGAGAAGTAGCTTTACATTACGATAATCAGATAGTACTTGCCAAGTGCTGACTTTTAAAATGGTTGTTTATAGGTCATTAAATCCACGTGCGTAATGCTGCCCTTTAATATATGTGACCTGAAAAGGTTTAAATGAAAGAACTAGGACTGTCAGAGTTAATCAGGTAACTTtgtgtgcattttttttttttaatatattgtCTGAAGGCATTCAAAAATATACTGAAAACAAGTCGAGTGTCTGCTTTCTCAATTTACATCATTTTGCCAACTGTTACTTTAGACAAAATTAAGATGTCaatattcttgtttttttttaatgaaaaatcTTAAATCGCACCTTAATTTGAGCAAATTCTGAAGTTGTGATAATTCACAGCAAACCCTGCGATTAAATAAAACGTGATGGTCCTAGAAAGGACCAAAgtaa

Function

NR:

description
catechol O-methyltransferase domain-containing protein 1 isoform X1

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008171 O-methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160639.1 False 1331 mRNA 0.42 7 39688077 39696553
XM_021575345.2 False 1300 mRNA 0.42 7 39688079 39695214
XM_021575348.2 False 1332 mRNA 0.42 7 39688079 39695379
XM_021575347.2 False 1342 mRNA 0.42 8 39688079 39695750
XM_021575346.2 True 1370 mRNA 0.42 7 39688079 39695846
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110499466 LOC106589878 coding downstream 19720 39664970 ~ 39668357 (-)
LOC110499601 NA coding downstream 29723 39630826 ~ 39658354 (-)
LOC118942070 NA coding downstream 118035 39569361 ~ 39570042 (-)
LOC110499545 hid1 coding downstream 586907 39070043 ~ 39101170 (-)
LOC110499462 LOC106589873 coding downstream 632995 39032016 ~ 39055082 (-)
LOC110499470 LOC106589875 coding upstream 100450 39797003 ~ 39800146 (-)
LOC100301650 LOC106611671 coding upstream 414803 40111355 ~ 40313496 (-)
LOC110499472 LOC106589908 coding upstream 635112 40331665 ~ 40350083 (-)
LOC110499553 LOC106589909 coding upstream 660687 40357234 ~ 40399083 (-)
LOC110517611 snx5 coding upstream 724502 40420879 ~ 40439528 (-)
G1693534 NA non-coding downstream 5913 39681965 ~ 39682164 (-)
G1693530 LOC106589877 non-coding downstream 13898 39671348 ~ 39674179 (-)
G1693522 NA non-coding downstream 23330 39664428 ~ 39664747 (-)
G1693519 NA non-coding downstream 28254 39659576 ~ 39659823 (-)
G1693560 NA non-coding upstream 29457 39726010 ~ 39726280 (-)
G1693561 NA non-coding upstream 31047 39727600 ~ 39757194 (-)
G1693569 NA non-coding upstream 61167 39757720 ~ 39759042 (-)
G1693697 NA non-coding upstream 182199 39878752 ~ 39879059 (-)
G1693707 NA non-coding upstream 192485 39889038 ~ 39889242 (-)
G1693485 LOC106589879 other downstream 73251 39613357 ~ 39614826 (-)
G1693393 NA other downstream 197999 39463430 ~ 39490078 (-)
G1693092 NA other downstream 423386 39264301 ~ 39264691 (-)
LOC110499548 hyep other upstream 799337 40472724 ~ 40497881 (-)
G1694632 NA other upstream 1216841 40913394 ~ 40914130 (-)
G1694739 NA other upstream 1316621 41013174 ~ 41013994 (-)

Expression

comtd1(cmtd1) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 250.
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comtd1(cmtd1) Expression in each Bioproject

Bar chart with 21 bars.
comtd1(cmtd1) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10000.
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Co-expression Network