LOC118942019


Basic Information

Item Value
gene id LOC118942019
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 41688135 ~ 41696129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955566.1
ATGGTCTCAGCTACACGGGGACCACCAAGCGGGGACCACCGAACGGGGACCACCAAACGGGGACTACCAAGCGGGGACCACCGAGCGGGGACCACCAAACGGGGACCACCGAGCGGGGACTACCGAGCGGGGACAACCGAACGGGGACCACCGAACGGGGACTACCGAGCGGGGACTACCAAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACTACCAGAACGGGGACTACCAAGCGGGGACTACCAGAACGGGGACTACAGAGCGGGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCAACGAGCGGGGACCACCGAACGGGGACCACCGAGCTCGGACTACCGAGCGGGGACCACCGAACGGGGACCACCGAGCGGGGACTACCGAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACTACCAGAACGGGGACTACCGAGCGGGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACCGAGCGCGGACTACCAGAACGGGGACTACCGAGCGCGGACTACCAGAACGGGGACCACCGAGCGGGGATTACCAGAACGGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACCGAGCGCGGACTACCAGAACGGGGACTACCGAGCGCGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACCACCAAGCGGGGACCACTGAACGGGGACCACCAAACGGGGACCACCAAGCAGGGACAACCGAAGGGGGACCACCAAACGGGGACCACCGAGCGGGGACTACCGAGCGGGGACTACCAGAACGGGGACTACCGAGCGGGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCGAGCTGGGACCACCGACCAAACGGGGACCACCAAGCAGGGACCACCGAAGGGGGACTACCGAGCGGGGACTACCGAGCGGGGACCACCGAACGGGCACCACCGAGCGGGGACTACCGAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACCACCGAGCGGGGACTACCAGAACGGGGACTACCGAGCGGGGACTACTGAAATGGGGACCACCGAGCGGGGACTTCCGAGCAGGGACCACCGAACGGGGACTACCGAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACTACCAGAACGGGGACTACCAAGCGGGGACTACCAGAACGGGGACCACTGAACGGGGACCACCAAACGGGGACCACCAAGCAGGGACCACCGAAGGGGGACCACCAAACGGGGACCACCGAGCGGGGACTACCGAGCGGGGACTACCAGAACGGGGACCACCCAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACCACCGAGCGGGGACCACCGAGCGGGCACCACCGAGCGGGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCGAGCTGGGACCACCGAGTGGGGACCACCGAACGGGGACCACCAAGCGGGGACCACTGAACGGGGACAGCCAAACGGGGACCACCAAGCAGGGACCACCGAAGGGGGACTACCGAGCGGGGACTACCGAGCGGGGACCACCGAACGGGCACCACCGAGCGGGGACTACCGAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACCACCGAGCGGGGACTACCGAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACTACCAGAACGGGGACTACCAAGCGGGGACTACCGAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACTACCAGAACGGGGACTACCAAGCGGGGACTACCAGAACGGGGACCACTGAACGGGGACCACCAAACGGGGACCACCAAGCAGGGACCACCGAAGGGGGACCACCAAACGGGGACCACCGAGCGGGGACTACCGAGCGGGGACTACCAGAACGGGGACCACCCAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACCACCGAGCGGGGACCACCGAGCGGGCACCACCGAGCGGGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCGAGCTGGGACCACCGAGTGGGGACCACCGAACGGGGACCACCAAGCGGGGACCACTGAACGGGGACCACCAAACTGGGACCACCAAGCAGGGACCACCGAAGGGGGACTACCGAGCTGGGACTACCAGAACGGGGACTAACAAGTGGGGACTACCAGAACGGGGACTACCGAGCGGGGATTACCAGAACGGGGACCACCGAGCGGGGATCACCGAGCGGGGACCACCGAGCGGGGACTACCAGAACGGGGACTACCGAGCGCGGACTACCAGAACGGGGACCACCGAGCGGGGACCCCCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACTACCGAGCGGGGACTATCAGAACGGGGACTACCAAGCGGGGACTACCAGAACGGGGACTACCGAGCGGGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACTACCAGAACGGGGACCACCAAGCGGGGACCACCAAACAGGGACTACCAAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCAAACGGGGACTACCAAGCGGGGACCACCAAGGACCACCAAGCGGGGACCACCAAGCGGGGACCACCAAGCGGGGACAACCGAACGGGGACTACCAAGCGGGGACCACCAAGCGGGGGCCACCAAGCGGGGACCAACAAGCGTGGACCACCGAACGGGGACTACCAGAACGGGGACCACCAAGCGGGGACCACCAAGCGGGGACCACCGAACGGGGACTACCAAGCGGGGACCACCAAGCGGGGACCACCAAGCGGGGACAACCGAACGGGGACTACCAAGCGGGGACCACCAAGCGGGGGCCACCAAGCGGGGACCAACAAGCGTGGACCACCGAACGGGGACTACCAGAACGGGGACCACCAAGCGGGGACCACCAAGCGGGGACCACCGAACGGGGACTACCAAGCGGGGACCACCAAGCGGGGACCACCGAACGTGGACCACCAAGCGGGGACCACCAAGCGTGGACCACCAAGCGTGGACCACCGAACGGGGACTACCAGAACGGGGACCACCAAGCGGGGACCACCAAGCGGGGACCACCAAACGGGGACAACCGAGCGGGGACCACCAAGCGGGGACCACCGAGCGGGGACCACCGAGAGGGGACCACCGAGCGGGGACTACCGAGCGGGGACCACTGAACGGGGACCACCAAGCGGGGACCACCAAGCGGGGACCACCAAGCAGGGACCACCGAAGGGGGACCACCAAACGGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACCGAGCGGGGACCACCAGAACGGGGACCACCAAGCAGGGACCACCAAGCAGGGACCACCGAAGGGGGACCACCAAACAGGGACCACCGAGCGGAGACCACCAAGCGGGGACCACCAAGCGGGGACCACCGAGCGGGGACCACCAGAACGGGGACCACCAAGCGGGGACCACCGTGCAGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACTGAACGGGGACCACCAAACGGGAACCACCAAGCAGGGACCACCGAAGGGGGACCACCAAACGGGGACCACCGAGCGGGGACTACCGAGCGGGGACTAACAGAACGGGGACTACCGAGCGGGGACTACCAGAACAGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACCACCGAGCGGGGACCACCGAGGACCACCAAGCGGGGACCACTGAACGGGGACCACCAAACGGGGACCACCAAGCAGGGACCACCGAAGGGGGACCACCAAACGGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACCAAACGGGGACTACCAAGCGGGGATCACCGAACGGGGACCACCAAGCGGGGACCACCGAGTGGGGACCACCGAGCGGGGACCACCAAACGGGGACTACCAAGCGGGGACCACCAAGTGGGGACCACCAAGCGGGGACCACCGAACGGGGACTACCAAGCGGGGACCACCAAGCGGGGACCACCAAGCGGTGACCACCAAGCGGGGACCACCGAACGGGGACCACCAAGCGGGGACCACCAAGCGGGGGCCACCAAGCGGGGACCACCAAGCGTGGACCACCGAACGGGGACTACCAGAACGGGGACCACCAAGCGGGGACCACCAAACGGGGACTACCAAGCAGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCAAACGGGGACTACCAAGCGGGGACCACCAAGTGGGGACCACCAAGCGGGGACCACCGAACGGGGACTACCAAGCGGGGACCACCAAGCGGGGACCACCAAGCGGGGACCACCAAGCGTGGACCACCGAACGGGGACCACCAAGCGGGGACCACCAAGCGGGGGCCACCAAGCGGGGACCACCAAGCGTGGACCACCGCACGGGGACTACCAGAACGGGGACTACCAAGCGGGGACCACCAAGCATGGACCACCGAACGGGGACTACCAGAACGGGGACCACCAAGCGGGGACCACCAAAACGGGGACAACCGAGCGGGGACCACCAAGCGGGGACCACCGAGCGGGGACCACCGAGAGGGGACCACCGAGAGGGGACCACCGAGCGGGGACTACCGAGCGGGGACCACCGAACGGGGACCACCAAGCGGGGACCACCAAGCGGGGACCACCAAGCAGGGACCACCAGAACGGGGACCACCAAGCGGGGACCACCGAGCAGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACTGAACGGGGACCACCAAACGGGGACCACCAAGCAGGGACCACCGAAAGGGGACCACCAAACGGGGACCACCGAGCGGGGACTACCGAGCGGGGACCACCGAGCGGGGACCACCGAACGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACTACCAGAACGGGGACCACCGAGCGGGGACCACCGAGCTGGGACCACCGAGTGGGGACCACCGAACGGGGACCACCAAGCGGGGACCACTGAACGGGGACCACCAAACGGGGACCACCAAGCAGGGACCACCGAAGGGGGACCACCAAACGGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACCAAACGGGGACTACCAAGCGGGGACCACCGAACGGGGACCACCAAGCGGGGACCACCGAGCGGGGACCACCGAGCGGGGACCACCAAGCGGGGACCACCGAGCGGGGACCATCAGAACGGGGACCACCAAGCGGGGACCACCAAACGGGGACAACCGAGCGGGGACCACCAAGCGGGGACCACCGAGCGGGGACCACCGAGAGGGGACCACCAAGCAGGGACCACCGAAGGGGGAACACCGAAGGGGGACCACCAAACGGGGACCACCAAGCAGGGACCAACGAATGGAGACCACCAAACAGGGACTACTTTTGGCTGAAATTACACAAACATTTTACAGTGGAAGTCCCTAA

Function

NR:

description
PREDICTED: mucin-2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955566.1 True 5697 mRNA 0.69 6 41688135 41696129

Neighbor

gene id symbol gene type direction distance location
LOC110499549 LOC106589914 coding upstream 1100553 40525993 ~ 40587582 (+)
LOC118942071 NA coding upstream 1185736 40498957 ~ 40502399 (+)
LOC110499485 NA coding upstream 1197350 40487956 ~ 40490785 (+)
ephx5 LOC105009996 coding upstream 1220999 40454794 ~ 40467136 (+)
mgme1 mgme1 coding upstream 1244151 40439921 ~ 40443984 (+)
LOC110499555 LOC106589919 coding downstream 133885 41830014 ~ 41862392 (+)
parga LOC106589925 coding downstream 477851 42173980 ~ 42282788 (+)
LOC110499494 LOC106589929 coding downstream 712133 42408262 ~ 42413033 (+)
LOC110499602 LOC106589930 coding downstream 719966 42416095 ~ 42419081 (+)
LOC110499605 LOC106590859 coding downstream 788415 42484544 ~ 42511247 (+)
G1695347 NA non-coding upstream 26936 41660906 ~ 41661199 (+)
G1695339 NA non-coding upstream 36204 41651641 ~ 41651931 (+)
G1695199 NA non-coding upstream 201813 41485860 ~ 41486322 (+)
G1695181 NA non-coding upstream 219475 41468422 ~ 41468660 (+)
G1695177 NA non-coding upstream 229783 41458119 ~ 41458352 (+)
G1695367 NA non-coding downstream 1220 41697349 ~ 41697768 (+)
G1695357 NA non-coding downstream 9175 41705304 ~ 41777461 (+)
G1695384 NA non-coding downstream 68088 41764217 ~ 41769233 (+)
G1695538 NA non-coding downstream 206219 41902348 ~ 41902722 (+)
G1695272 NA other upstream 69630 41618027 ~ 41618505 (+)
G1693914 NA other upstream 1475182 40211522 ~ 40212953 (+)
G1693700 NA other upstream 1805510 39881958 ~ 39882625 (+)
G1693699 NA other upstream 1806292 39881349 ~ 39881843 (+)
G1693184 NA other upstream 2328500 39356345 ~ 39359635 (+)
LOC118942073 NA other downstream 826381 42522510 ~ 42527008 (+)
G1696324 NA other downstream 1083870 42779999 ~ 42780549 (+)
G1696541 NA other downstream 1437498 43133627 ~ 43134013 (+)
LOC110499564 NA other downstream 1441264 43137388 ~ 43148369 (+)

Expression


Co-expression Network