LOC118942021 (micu1)


Basic Information

Item Value
gene id LOC118942021
gene name micu1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43448714 ~ 43494181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955570.1
atgacgGATGAAGGGGATGCAGGGCGGAGGAAGATTACCCAGGATTGGGAGAAGTTTGCAGATGAGGACAGCATCTTCTTCACACTGGGGGAGTGTGGTCTCATCTCCTTCTCTGATTACATCTTCCTCACTATCGTGCTCTCTAcgcCCCAGAGGAACTTTGAGATCGCCTTCAAGATGTTTGATCTGAACGGAGACGGAGAGGTGGACCTGGAGGAGTTTGAACAGgtCCAGAGTATCATCAGGTCTCAGACCAGTATGGGGATGCGTCACCGGGACCGCTCCACTACGGGTAACACCCTGAAGACTGGCGGCTGCAGCTCCGCTCTTACCACATACTTCTttgGTGCCGATCTGAAGGACAAACTGACCATTGGACACTTCCTGGAGTTCCAGAGAAAACTGCAACATGATGTCCTCAAACTagagtttATGCGTAATGACCCAGTGGATGGGTGCATAACAGAGAGACAGTTTGGAGGCATGCTGCTGTCCTACAGTGGGATccagtcacacaaacacaaacagatgcAGAAGGGACTCAAGAAGATGTTCAGAGATGCCCAGggCATTACGTTTGAAGAGGTGAAAAATTTCTTTACCTTCCTGAAAAATGTCAATGATGTGGACACAGCTCTGAGTTTCCACCACATGGCCGGAGCCTCCATAGACAAAGccACGATGAAGCAGGTAGCTCGTACGGTGGCTAAAGTGGATCTGTCTGATCATGTGTGTGACGTTGTGTTTGCTCTGTTCGACTGTGATGgTAATGGAGAACTGAGTAATAAGGAGTTTGTAGCCATAATGAAGCAGCGCCTGATGCGAGGTCTAGAGAAACCTAAAGACATGGGTTTCACCCGGTTGGTACGAGCCATGTTGAAGTGTGCCCAAGACACCGCACGGGAGATCGCCTCTCCCAAACAGAATTAGAGAcctgtgtctatgtgtctgtgtctgtctgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtctgtctgtgtctgtgtgtgtctgtgtgtgtgtgtgtctgtgtctgtgtctgtgtgtgtgtgtgtgtgtctgtgagtgtctgtgaGGTCTACTCTACACAAAGACCAGCCAGAGGCTTCCAtcctctttcttctcttcttttAAATGCCAACAATAGGCAACTATAACTCAGTATATCTCATCAGAACAGAGGGTGATTCAACTCATTAGGACCTCAGATATGATGGGAATATAATCAGTCACGTAATCTACTATGTGCTTAGTTGGGCATtatactaagggctgtatcccaaatggcaccctattccctatacagtaccctattccctatacggTACATTTggaagtgttcagaccccttgactcattccacattctgtaacgtta

Function

symbol description
micu1 Predicted to enable calcium ion binding activity. Predicted to be involved in calcium import into the mitochondrion and positive regulation of mitochondrial calcium ion concentration. Predicted to act upstream of or within calcium ion transport. Predicted to be located in mitochondrial inner membrane and mitochondrial intermembrane space. Predicted to be integral component of mitochondrial membrane. Predicted to be part of uniplex complex. Is expressed in female organism; heart; and heart tube. Human ortholog(s) of this gene implicated in myopathy with extrapyramidal signs. Orthologous to human MICU1 (mitochondrial calcium uptake 1).

NR:

description
calcium uptake protein 1, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955570.1 True 1404 mRNA 0.48 9 43448714 43494181

Neighbor

gene id symbol gene type direction distance location
LOC110510394 NA coding upstream 45950 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 300345 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 326819 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 596975 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 621622 42803589 ~ 42827234 (+)
LOC110499505 LOC106589952 coding downstream 103906 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 483099 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 529838 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 540307 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 597219 44091400 ~ 44134903 (+)
G1696851 NA non-coding upstream 19781 43428666 ~ 43428933 (+)
G1696847 NA non-coding upstream 26968 43420478 ~ 43421746 (+)
G1696846 NA non-coding upstream 28357 43420156 ~ 43420357 (+)
G1696845 NA non-coding upstream 29151 43419322 ~ 43419563 (+)
G1696832 NA non-coding upstream 61143 43387257 ~ 43387571 (+)
G1696871 NA non-coding downstream 1952 43496133 ~ 43497100 (+)
G1696823 NA non-coding downstream 42976 43537157 ~ 43551194 (+)
G1696876 NA non-coding downstream 59549 43553730 ~ 43554070 (+)
G1696879 NA non-coding downstream 68399 43562580 ~ 43562865 (+)
G1696563 NA other upstream 239196 43207559 ~ 43209518 (+)
G1696541 NA other upstream 314701 43133627 ~ 43134013 (+)
G1696324 NA other upstream 668165 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 921706 42522510 ~ 42527008 (+)
G1696904 NA other downstream 129303 43623484 ~ 43626360 (+)
G1696905 NA other downstream 132207 43626388 ~ 43661355 (+)
G1696916 NA other downstream 175383 43669564 ~ 43670353 (+)
G1697152 NA other downstream 373048 43867229 ~ 43908497 (+)
G1697222 NA other downstream 737141 44231322 ~ 44231767 (+)

Expression


Co-expression Network