Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499507 |
| gene name | LOC106589953 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 43558407 ~ 43586489 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nucleolar and coiled-body phosphoprotein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036956395.1 | False | 5001 | mRNA | 0.53 | 15 | 43558407 | 43586483 |
| XM_036956403.1 | False | 4617 | mRNA | 0.53 | 16 | 43558407 | 43586483 |
| XM_036956404.1 | False | 4617 | mRNA | 0.53 | 16 | 43558407 | 43586483 |
| XM_036956390.1 | False | 5053 | mRNA | 0.53 | 15 | 43558407 | 43586484 |
| XM_036956391.1 | False | 5050 | mRNA | 0.53 | 15 | 43558407 | 43586484 |
| XM_036956393.1 | False | 5017 | mRNA | 0.53 | 16 | 43558407 | 43586484 |
| XM_036956397.1 | False | 4975 | mRNA | 0.53 | 15 | 43558407 | 43586484 |
| XM_036956398.1 | False | 4963 | mRNA | 0.53 | 14 | 43558407 | 43586484 |
| XM_036956399.1 | False | 4936 | mRNA | 0.53 | 14 | 43558407 | 43586484 |
| XM_036956400.1 | False | 4933 | mRNA | 0.53 | 14 | 43558407 | 43586484 |
| XM_036956392.1 | False | 5024 | mRNA | 0.53 | 16 | 43558407 | 43586485 |
| XM_036956394.1 | False | 5012 | mRNA | 0.53 | 16 | 43558407 | 43586485 |
| XM_036956396.1 | False | 5000 | mRNA | 0.53 | 16 | 43558407 | 43586485 |
| XM_036956401.1 | False | 4910 | mRNA | 0.53 | 16 | 43558407 | 43586485 |
| XM_036956402.1 | True | 5038 | mRNA | 0.53 | 15 | 43558407 | 43586489 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518228 | mcu | coding | downstream | 253403 | 43194834 ~ 43305004 (-) |
| LOC110499563 | LOC106589940 | coding | downstream | 825115 | 42683879 ~ 42733292 (-) |
| LOC110499498 | LOC106578834 | coding | downstream | 913148 | 42597760 ~ 42645259 (-) |
| LOC110499497 | NA | coding | downstream | 969408 | 42587728 ~ 42588999 (-) |
| cisd1 | LOC106589936 | coding | downstream | 971368 | 42582333 ~ 42587039 (-) |
| LOC110492809 | unc5b | coding | upstream | 43512 | 43630001 ~ 43803224 (-) |
| LOC118942076 | NA | coding | upstream | 219009 | 43805498 ~ 43807349 (-) |
| tbata | LOC106577277 | coding | upstream | 368194 | 43954683 ~ 43966333 (-) |
| LOC110499516 | LOC106578803 | coding | upstream | 403900 | 43990389 ~ 44016464 (-) |
| LOC110499513 | LOC106578802 | coding | upstream | 470958 | 44057447 ~ 44081042 (-) |
| G1697018 | NA | non-coding | downstream | 6145 | 43503034 ~ 43552262 (-) |
| G1697019 | NA | non-coding | downstream | 22317 | 43532776 ~ 43536090 (-) |
| G1697021 | NA | non-coding | downstream | 40949 | 43516450 ~ 43517458 (-) |
| G1697017 | NA | non-coding | downstream | 56643 | 43501425 ~ 43502041 (-) |
| G1697014 | NA | non-coding | downstream | 62285 | 43495339 ~ 43496122 (-) |
| G1697039 | NA | non-coding | upstream | 18228 | 43604717 ~ 43606503 (-) |
| G1697037 | NA | non-coding | upstream | 27732 | 43614221 ~ 43615698 (-) |
| G1697051 | NA | non-coding | upstream | 38671 | 43625160 ~ 43626260 (-) |
| G1697054 | NA | non-coding | upstream | 41390 | 43627879 ~ 43661355 (-) |
| G1697056 | NA | non-coding | upstream | 46695 | 43633184 ~ 43633592 (-) |
| G1696714 | NA | other | downstream | 426709 | 43130200 ~ 43131698 (-) |
| G1696673 | NA | other | downstream | 509044 | 43047738 ~ 43049363 (-) |
| G1696606 | NA | other | downstream | 675615 | 42882169 ~ 42882792 (-) |
| G1696403 | NA | other | downstream | 731172 | 42826595 ~ 42827235 (-) |
| G1697090 | NA | other | upstream | 154818 | 43741307 ~ 43741664 (-) |
| G1697091 | NA | other | upstream | 158306 | 43744795 ~ 43745102 (-) |
| G1697093 | NA | other | upstream | 160010 | 43746499 ~ 43747178 (-) |
| G1697647 | LOC106589972 | other | upstream | 950384 | 44490843 ~ 44551607 (-) |
