Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499517 |
| gene name | LOC106589992 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 43977280 ~ 43987101 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| peptidyl-prolyl cis-trans isomerase A-like |
| id | description |
|---|---|
| K09565 | PPIF; peptidyl-prolyl isomerase F (cyclophilin D) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021576651.2 | True | 969 | mRNA | 0.49 | 6 | 43977280 | 43987101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499505 | LOC106589952 | coding | upstream | 361582 | 43552789 ~ 43615700 (+) |
| LOC118942021 | micu1 | coding | upstream | 483099 | 43448714 ~ 43494181 (+) |
| LOC110510394 | NA | coding | upstream | 574516 | 43371693 ~ 43402764 (+) |
| LOC110499564 | NA | coding | upstream | 828911 | 43137388 ~ 43148369 (+) |
| LOC110499502 | pde10a | coding | upstream | 855385 | 42950949 ~ 43125594 (+) |
| LOC110499607 | NA | coding | downstream | 36918 | 44024019 ~ 44028357 (+) |
| LOC110499515 | LOC106589989 | coding | downstream | 47387 | 44034488 ~ 44055611 (+) |
| capn2 | LOC106589959 | coding | downstream | 104299 | 44091400 ~ 44134903 (+) |
| LOC110499567 | LOC106589958 | coding | downstream | 147908 | 44135009 ~ 44181809 (+) |
| LOC110499566 | LOC105028001 | coding | downstream | 194887 | 44181988 ~ 44263417 (+) |
| G1697166 | NA | non-coding | upstream | 22809 | 43909000 ~ 43954471 (+) |
| G1697168 | NA | non-coding | upstream | 35250 | 43929897 ~ 43942030 (+) |
| G1697152 | NA | non-coding | upstream | 68783 | 43867229 ~ 43908497 (+) |
| G1697164 | NA | non-coding | upstream | 78765 | 43891305 ~ 43898515 (+) |
| G1697155 | NA | non-coding | upstream | 83446 | 43873230 ~ 43893834 (+) |
| G1697232 | NA | non-coding | downstream | 70357 | 44057458 ~ 44068769 (+) |
| G1697234 | NA | non-coding | downstream | 72962 | 44060063 ~ 44061339 (+) |
| G1697269 | NA | non-coding | downstream | 179818 | 44166919 ~ 44167354 (+) |
| G1697271 | NA | non-coding | downstream | 187080 | 44174181 ~ 44174521 (+) |
| G1697277 | NA | non-coding | downstream | 212600 | 44199701 ~ 44200676 (+) |
| G1696916 | NA | other | upstream | 306927 | 43669564 ~ 43670353 (+) |
| G1696905 | NA | other | upstream | 315925 | 43626388 ~ 43661355 (+) |
| G1696904 | NA | other | upstream | 350920 | 43623484 ~ 43626360 (+) |
| G1696563 | NA | other | upstream | 767762 | 43207559 ~ 43209518 (+) |
| G1697222 | NA | other | downstream | 244221 | 44231322 ~ 44231767 (+) |
| G1697374 | NA | other | downstream | 511559 | 44498660 ~ 44499846 (+) |
| LOC110499568 | LOC106589976 | other | downstream | 899966 | 44885773 ~ 44922697 (+) |
| G1698119 | yo84 | other | downstream | 1124465 | 45111566 ~ 45112361 (+) |
| G1698413 | i2b2b | other | downstream | 1709095 | 45696196 ~ 45697330 (+) |
