LOC118942078


Basic Information

Item Value
gene id LOC118942078
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 46022894 ~ 46025800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038029.1
tactggggtctcaccaccatcattctaatgggttaggttatactgggctctcaccaccatcattctaatggattaTGTTATACTGGGCTCTAACCATCATCATTCTAATTGGTTAGGTTATACTGCGCTCTCacctccatcattctaatgggttaggttatactggtctctaaccatcattctaatgggttaggttatactggtctctctccaccatcattctaatgggttaggttatactggtctctcaccaccatcattctaatgggtttgGATATACTGCGCTCTCacctccatcattctaatgggttaggttatactggtctctaaccatcattctaatgggttaggttatactggtctctctccaccatcattctaatgggttaggttatactggtctctcaccaccatcattctaatgggtttgGATATACTGCGCTCTCacctccatcattctaatgggttaggttatactggtctctaaccatcattctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038029.1 True 499 mRNA 0.42 3 46022894 46025800

Neighbor

gene id symbol gene type direction distance location
LOC118942022 NA coding upstream 342992 45678925 ~ 45679902 (+)
LOC110515455 jag1 coding upstream 578881 45324901 ~ 45444013 (+)
LOC110499568 LOC106589976 coding upstream 1100197 44885773 ~ 44922697 (+)
LOC110499508 LOC106589972 coding upstream 1485176 44402023 ~ 44537718 (+)
LOC110499511 LOC106578785 coding upstream 1660920 44337645 ~ 44361974 (+)
tsnax tsnax coding downstream 131834 46157634 ~ 46174248 (+)
disc1 LOC106595121 coding downstream 152801 46178601 ~ 46308949 (+)
LOC110499530 LOC106590013 coding downstream 386712 46412512 ~ 46501346 (+)
LOC110499521 msmb coding downstream 520837 46546637 ~ 46552961 (+)
mrpl2 rl2 coding downstream 537244 46563044 ~ 46577877 (+)
G1698796 NA non-coding upstream 4841 46017812 ~ 46018053 (+)
G1698496 NA non-coding upstream 84592 45935596 ~ 45938302 (+)
G1698480 NA non-coding upstream 113119 45906925 ~ 45909775 (+)
G1698472 NA non-coding upstream 125563 45896747 ~ 45897331 (+)
G1698465 NA non-coding upstream 135353 45886799 ~ 45887541 (+)
G1698806 NA non-coding downstream 348 46026148 ~ 46027909 (+)
G1698807 NA non-coding downstream 3500 46029300 ~ 46037500 (+)
G1698808 NA non-coding downstream 10270 46036070 ~ 46045979 (+)
G1698811 NA non-coding downstream 20248 46046048 ~ 46046636 (+)
G1698822 NA non-coding downstream 28505 46054305 ~ 46054504 (+)
G1698414 NA other upstream 321793 45700090 ~ 45701101 (+)
G1698413 i2b2b other upstream 325564 45696196 ~ 45697330 (+)
G1698119 yo84 other upstream 910533 45111566 ~ 45112361 (+)
G1697374 NA other upstream 1523048 44498660 ~ 44499846 (+)
G1698884 NA other downstream 163145 46188945 ~ 46190421 (+)
LOC118942483 NA other downstream 556070 46580927 ~ 46588053 (+)

Expression


Co-expression Network