Gene
RNA
| Item | Value |
|---|---|
| gene id | G1651819 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 1383744 ~ 1384126 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC111193553 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1890802 | True | 383 | lncRNA | 0.41 | 1 | 1383744 | 1384126 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498798 | vatl | coding | upstream | 289476 | 1071658 ~ 1094268 (+) |
| LOC110498792 | LOC106578302 | coding | upstream | 670763 | 662693 ~ 712981 (+) |
| LOC110498791 | brsk1 | coding | upstream | 740047 | 613176 ~ 643697 (+) |
| LOC110498790 | LOC106578304 | coding | upstream | 809206 | 535487 ~ 574538 (+) |
| LOC110498715 | NA | coding | upstream | 868615 | 497928 ~ 515129 (+) |
| LOC118942081 | NA | coding | downstream | 395317 | 1779443 ~ 1786132 (+) |
| LOC110498718 | LOC106579196 | coding | downstream | 532241 | 1916367 ~ 2031184 (+) |
| LOC110498803 | LOC100194623 | coding | downstream | 706215 | 2090341 ~ 2105851 (+) |
| LOC110498804 | LOC106578327 | coding | downstream | 746933 | 2131059 ~ 2162975 (+) |
| prodh2 | prodh2 | coding | downstream | 782172 | 2166298 ~ 2199898 (+) |
| G1651795 | NA | non-coding | upstream | 30449 | 1351977 ~ 1353295 (+) |
| G1651806 | NA | non-coding | upstream | 37858 | 1345637 ~ 1345886 (+) |
| G1651805 | NA | non-coding | upstream | 38409 | 1345129 ~ 1345335 (+) |
| G1651799 | NA | non-coding | upstream | 45843 | 1337701 ~ 1337901 (+) |
| G1651791 | NA | non-coding | upstream | 55012 | 1326984 ~ 1328732 (+) |
| G1651823 | NA | non-coding | downstream | 3124 | 1387250 ~ 1387475 (+) |
| G1651830 | NA | non-coding | downstream | 14173 | 1398299 ~ 1398509 (+) |
| G1651832 | NA | non-coding | downstream | 20965 | 1405091 ~ 1405418 (+) |
| G1651853 | NA | non-coding | downstream | 65918 | 1450044 ~ 1450421 (+) |
| G1651877 | NA | non-coding | downstream | 114688 | 1498814 ~ 1500768 (+) |
| G1652131 | NA | other | downstream | 264796 | 1648922 ~ 1649135 (+) |
| G1652237 | NA | other | downstream | 359797 | 1743923 ~ 1744380 (+) |
| G1654400 | NA | other | downstream | 2512977 | 3897103 ~ 3897390 (+) |
| G1654426 | NA | other | downstream | 2565311 | 3949437 ~ 3955465 (+) |
| G1655848 | NA | other | downstream | 3843426 | 5227552 ~ 5229928 (+) |
