G1654127



Basic Information


Item Value
gene id G1654127
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 3370901 ~ 3371401 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1893326
gggcgtgcaaaattattcagcccctttattttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtctgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagccctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggac

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1893326 True 501 TUCP 0.45 1 3370901 3371401

Neighbor


gene id symbol gene type direction distance location
tdrd1 tdrd1 coding downstream 187042 3095894 ~ 3183859 (-)
LOC110498821 nrap coding downstream 327675 2931873 ~ 3043226 (-)
LOC110498721 NA coding downstream 660005 2679544 ~ 2710896 (-)
LOC110498813 maz coding downstream 796762 2558384 ~ 2574139 (-)
LOC118942026 NA coding downstream 823575 2546549 ~ 2547326 (-)
dclre1a dclre1a coding upstream 6994 3378395 ~ 3414101 (-)
trnak-cuu-77 NA coding upstream 121095 3491868 ~ 3508267 (-)
trnak-cuu-78 NA coding upstream 122509 3493910 ~ 3493982 (-)
trnak-cuu-79 NA coding upstream 126734 3498135 ~ 3498207 (-)
trnak-uuu-128 NA coding upstream 128148 3499549 ~ 3499621 (-)
G1654065 NA non-coding downstream 85771 3283737 ~ 3285130 (-)
G1654012 NA non-coding downstream 150534 3220097 ~ 3220367 (-)
G1654011 NA non-coding downstream 152747 3217949 ~ 3218154 (-)
G1654008 NA non-coding downstream 155428 3215236 ~ 3215473 (-)
G1654006 NA non-coding downstream 156971 3213667 ~ 3213930 (-)
G1654180 nhlrc2 non-coding upstream 94466 3465867 ~ 3467643 (-)
G1654238 NA non-coding upstream 329602 3701003 ~ 3701243 (-)
G1654239 NA non-coding upstream 330819 3702220 ~ 3702503 (-)
G1654241 NA non-coding upstream 332393 3703794 ~ 3704080 (-)
G1654002 NA other downstream 163822 3206784 ~ 3207079 (-)
G1653272 NA other downstream 625267 2694199 ~ 2745634 (-)
G1653208 NA other downstream 693469 2677001 ~ 2677432 (-)
G1652937 NA other downstream 1054377 2316088 ~ 2316524 (-)
G1652691 NA other downstream 1546223 1823675 ~ 1824678 (-)
ablim1b ablim1 other upstream 257094 3628495 ~ 3705213 (-)
LOC110498829 LOC106578368 other upstream 957945 4217971 ~ 4333041 (-)
G1655098 NA other upstream 992315 4363716 ~ 4363983 (-)
LOC110498832 LOC106578311 other upstream 1416185 4787586 ~ 4789906 (-)
G1655336 NA other upstream 1433791 4805192 ~ 4805580 (-)

Expression



Co-expression Network