G1657368 (LOC105030512)


Basic Information

Item Value
gene id G1657368
gene name LOC105030512
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 7003229 ~ 7003556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1896976
atgtctggtgaggacctgccttacaacaggcctacaagccctcagtccagcctattgcggacagtctgagcactgatggagggattgtgctttcctggtgtaactcgggcagttgttgttgccatcctgtacctgtcccgcaggtgtgatgttcggatgtaccgatcctgtgcaggtgttgttacacgtggtctgccactgcgaggacgatcagctgtccgtcctatctccctgtagcgctgtcctaggcgtctcacagtacggacaatggaatttattgccctggccacatctgcagtcctcatgcctccatgCAGCATGCCAacgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC109630516

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1896976 True 328 lncRNA 0.55 1 7003229 7003556

Neighbor

gene id symbol gene type direction distance location
LOC110498870 LOC106589512 coding upstream 221614 6777999 ~ 6781615 (+)
spag9b LOC106589513 coding upstream 295142 6657142 ~ 6709243 (+)
daglb LOC100286527 coding upstream 348017 6637448 ~ 6655212 (+)
LOC110498867 LOC106589515 coding upstream 378441 6599585 ~ 6624788 (+)
kdelr2b LOC106589518 coding upstream 431771 6564989 ~ 6571458 (+)
LOC110498876 st2b1 coding downstream 6188 7009744 ~ 7015434 (+)
wu:fj29h11 LOC106589505 coding downstream 12127 7015665 ~ 7074332 (+)
bsk146 LOC106589506 coding downstream 71925 7075481 ~ 7093540 (+)
dhrs7cb dhrs7c coding downstream 187251 7190807 ~ 7194759 (+)
LOC110498883 LOC106589500 coding downstream 198320 7201876 ~ 7212181 (+)
G1657366 NA non-coding upstream 1255 7001689 ~ 7001974 (+)
G1657363 NA non-coding upstream 4388 6998363 ~ 6998841 (+)
G1657361 NA non-coding upstream 7164 6995622 ~ 6996065 (+)
G1657353 LOC106589507 non-coding upstream 19511 6982659 ~ 6983718 (+)
G1657347 NA non-coding upstream 27722 6975264 ~ 6975507 (+)
G1657389 LOC106589502 non-coding downstream 111355 7114911 ~ 7116042 (+)
G1657423 NA non-coding downstream 253581 7257137 ~ 7261264 (+)
G1657479 LOC106589498 non-coding downstream 262703 7266259 ~ 7267044 (+)
G1657582 NA non-coding downstream 398529 7402085 ~ 7402359 (+)
G1657605 NA non-coding downstream 427485 7431041 ~ 7431260 (+)
G1656720 NA other upstream 1009479 5990474 ~ 5993750 (+)
G1655848 NA other upstream 1773301 5227552 ~ 5229928 (+)
G1654426 NA other upstream 3047764 3949437 ~ 3955465 (+)
G1654400 NA other upstream 3105839 3897103 ~ 3897390 (+)
G1652237 NA other upstream 5258849 1743923 ~ 1744380 (+)
G1658572 NA other downstream 700950 7704506 ~ 7705151 (+)
unk LOC106589472 other downstream 1390115 8392044 ~ 8401533 (+)
LOC110498922 cssa28h17orf62 other downstream 1520736 8524125 ~ 8527761 (+)
G1661477 NA other downstream 3048066 10051622 ~ 10052089 (+)

Expression


Co-expression Network