G1660446


Basic Information

Item Value
gene id G1660446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 9181680 ~ 9181981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1900322
tgcttcctggctgatgttttggtcactttgaaTGCGGGTGGtcctttcactctagtggtaacaTGAGAcgaagtctacaacccacacaagtggctcaggtagtgcagctcatccaggatggcacatcaatgcgagctgtggcaagaaggtttgctgtgtctgtcagcgtagtgttcagagcatggaggcgctaccaggagacaggccagtacatcaggagatgtggaggaggccataggagggcaacaacccagcagcaggaccgctacctccgcctttgtgcaaggaggagcaggaggagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1900322 True 302 lncRNA 0.55 1 9181680 9181981

Neighbor

gene id symbol gene type direction distance location
uts2r2 ogfod3 coding upstream 610900 8536386 ~ 8570780 (+)
LOC110498922 cssa28h17orf62 coding upstream 653919 8524125 ~ 8527761 (+)
LOC110498917 NA coding upstream 706375 8467537 ~ 8475305 (+)
wbp2 LOC106589470 coding upstream 753097 8418868 ~ 8428583 (+)
unk LOC106589472 coding upstream 780147 8392044 ~ 8401533 (+)
LOC110498928 LOC106589233 coding downstream 149727 9331708 ~ 9335282 (+)
LOC110498929 LOC106589453 coding downstream 153152 9335133 ~ 9359628 (+)
LOC110498735 LOC106589194 coding downstream 181501 9363482 ~ 9398815 (+)
LOC110498931 LOC106589451 coding downstream 219093 9401074 ~ 9430866 (+)
LOC110498932 LOC106589450 coding downstream 258664 9440645 ~ 9468339 (+)
G1660443 NA non-coding upstream 944 9180269 ~ 9180736 (+)
G1660436 NA non-coding upstream 7344 9174108 ~ 9174336 (+)
G1660434 NA non-coding upstream 10208 9171266 ~ 9171472 (+)
G1660221 NA non-coding upstream 17856 9163112 ~ 9163824 (+)
G1660125 NA non-coding upstream 237798 8943222 ~ 8943882 (+)
G1660448 NA non-coding downstream 822 9182803 ~ 9183026 (+)
G1660457 NA non-coding downstream 10915 9192896 ~ 9193950 (+)
G1660499 spata20 non-coding downstream 76210 9258191 ~ 9258791 (+)
G1660500 spata20 non-coding downstream 86196 9268177 ~ 9268676 (+)
G1658572 NA other upstream 1476529 7704506 ~ 7705151 (+)
wu:fj29h11 LOC106589505 other upstream 2160596 7015665 ~ 7074332 (+)
G1656720 NA other upstream 3187930 5990474 ~ 5993750 (+)
G1661477 NA other downstream 869641 10051622 ~ 10052089 (+)
G1662037 NA other downstream 1294186 10476167 ~ 10476689 (+)
LOC110499585 NA other downstream 1620703 10802684 ~ 10805251 (+)
LOC110498940 LOC106589438 other downstream 1677174 10850770 ~ 10866995 (+)
G1662536 LOC106589414 other downstream 2122829 11304810 ~ 11306183 (+)

Expression


Co-expression Network