G1660612


Basic Information

Item Value
gene id G1660612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 9510317 ~ 9510536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1900503
ctgcattgttggttaagggcttctaagtaagcatttcatggtaaggtctacaccttctgtattcggcgcatgtgacaaatacaatttgatttgatcaaaactaaacgttgaaatgacgtctgtgcccaaTGGGCAGGGACTGGCAAACTGGTTCATGGAAAGCCATtagaagtagaggtcgaccgatttatgatttttcaacgctgataccgattattgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1900503 True 220 lncRNA 0.42 1 9510317 9510536

Neighbor

gene id symbol gene type direction distance location
LOC110498736 LOC106589448 coding upstream 7529 9483623 ~ 9502788 (+)
LOC110499583 NA coding upstream 28018 9476862 ~ 9482299 (+)
LOC110498932 LOC106589450 coding upstream 41978 9440645 ~ 9468339 (+)
LOC118942032 NA coding upstream 45263 9462107 ~ 9465054 (+)
LOC110498931 LOC106589451 coding upstream 79451 9401074 ~ 9430866 (+)
LOC110499584 NA coding downstream 528029 10038565 ~ 10041363 (+)
LOC100305179 gna13 coding downstream 1269862 10780398 ~ 10782116 (+)
LOC110499585 NA coding downstream 1292191 10802684 ~ 10805251 (+)
LOC110498938 LOC106589439 coding downstream 1316228 10826764 ~ 10828429 (+)
LOC110498939 LOC106589440 coding downstream 1318682 10829218 ~ 10837113 (+)
LOC110498735 LOC106589194 non-coding upstream 137396 9363482 ~ 9398815 (+)
G1660500 spata20 non-coding upstream 241641 9268177 ~ 9268676 (+)
G1660499 spata20 non-coding upstream 251526 9258191 ~ 9258791 (+)
G1660457 NA non-coding upstream 316367 9192896 ~ 9193950 (+)
G1660448 NA non-coding upstream 327291 9182803 ~ 9183026 (+)
G1660613 NA non-coding downstream 675 9511211 ~ 9511450 (+)
G1660614 NA non-coding downstream 3810 9514346 ~ 9514597 (+)
G1660519 NA non-coding downstream 9273 9519809 ~ 9520023 (+)
G1660625 NA non-coding downstream 20672 9531208 ~ 9531480 (+)
G1660630 NA non-coding downstream 25159 9535695 ~ 9535944 (+)
LOC110498922 cssa28h17orf62 other upstream 982797 8524125 ~ 8527761 (+)
unk LOC106589472 other upstream 1114841 8392044 ~ 8401533 (+)
G1658572 NA other upstream 1805166 7704506 ~ 7705151 (+)
wu:fj29h11 LOC106589505 other upstream 2489233 7015665 ~ 7074332 (+)
G1656720 NA other upstream 3516567 5990474 ~ 5993750 (+)
G1661477 NA other downstream 541086 10051622 ~ 10052089 (+)
G1662037 NA other downstream 965631 10476167 ~ 10476689 (+)
LOC110498940 LOC106589438 other downstream 1348619 10850770 ~ 10866995 (+)
G1662536 LOC106589414 other downstream 1794274 11304810 ~ 11306183 (+)

Expression


Co-expression Network