Gene
RNA
| Item | Value |
|---|---|
| gene id | G1661111 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 9560831 ~ 9567261 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1901034 | False | 1138 | lncRNA | 0.49 | 2 | 9560831 | 9564166 |
| TU1901035 | True | 579 | lncRNA | 0.49 | 2 | 9563403 | 9567261 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498935 | LOC106589231 | coding | downstream | 8094 | 9548938 ~ 9552737 (-) |
| nme2a | LOC106589447 | coding | downstream | 47133 | 9506374 ~ 9513698 (-) |
| trnaa-agc-8 | NA | coding | downstream | 231689 | 9329070 ~ 9329142 (-) |
| pkd1b | LOC106589455 | coding | downstream | 249981 | 9281357 ~ 9310850 (-) |
| spata20 | spata20 | coding | downstream | 289318 | 9193289 ~ 9271513 (-) |
| LOC110498737 | ca10 | coding | upstream | 110639 | 9677900 ~ 9986739 (-) |
| LOC110498936 | LOC106589191 | coding | upstream | 1042486 | 10609747 ~ 10668872 (-) |
| LOC110498937 | LOC106589191 | coding | upstream | 1136120 | 10703381 ~ 10704272 (-) |
| LOC118942033 | NA | coding | upstream | 1175687 | 10742948 ~ 10746240 (-) |
| LOC110498738 | NA | coding | upstream | 1191720 | 10758981 ~ 10760570 (-) |
| G1661094 | NA | non-coding | downstream | 25255 | 9535307 ~ 9535576 (-) |
| G1661061 | NA | non-coding | downstream | 77958 | 9482643 ~ 9482873 (-) |
| G1661060 | NA | non-coding | downstream | 78285 | 9482265 ~ 9482546 (-) |
| G1661056 | NA | non-coding | downstream | 86022 | 9474589 ~ 9474809 (-) |
| G1660999 | NA | non-coding | downstream | 121424 | 9431781 ~ 9439407 (-) |
| G1661384 | NA | non-coding | upstream | 423387 | 9990648 ~ 9990861 (-) |
| G1661478 | NA | non-coding | upstream | 484318 | 10051579 ~ 10051913 (-) |
| G1661479 | NA | non-coding | upstream | 484837 | 10052098 ~ 10052434 (-) |
| G1661481 | NA | non-coding | upstream | 485599 | 10052860 ~ 10053186 (-) |
| G1661503 | NA | non-coding | upstream | 497313 | 10064574 ~ 10064846 (-) |
| G1661001 | LOC106589450 | other | downstream | 100716 | 9422783 ~ 9460115 (-) |
| G1661023 | NA | other | downstream | 159884 | 9399117 ~ 9400947 (-) |
| LOC110498913 | h3f3b | other | downstream | 1171577 | 8386968 ~ 8389308 (-) |
| LOC110498864 | LOC106589517 | other | downstream | 2989376 | 6568700 ~ 6582912 (-) |
| G1657869 | LOC106589521 | other | downstream | 3051251 | 6509119 ~ 6509580 (-) |
| G1662039 | NA | other | upstream | 909702 | 10476963 ~ 10477185 (-) |
| LOC110498953 | NA | other | upstream | 1554652 | 11121913 ~ 11158776 (-) |
| G1663264 | NA | other | upstream | 1975355 | 11542616 ~ 11543091 (-) |
| G1664239 | NA | other | upstream | 2682889 | 12250150 ~ 12251106 (-) |
| G1665402 | LOC106589366 | other | upstream | 3834020 | 13401281 ~ 13407377 (-) |
