G1661409


Basic Information

Item Value
gene id G1661409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 10003992 ~ 10004254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1901338
TCTGAGTACAGCctgagtgtctatgtatgcggatgattcaacactatacacgtcagctaccacaccaagtgccattactgcaacacttaacaaagagctgcagtcagtttcagaatgggtggcaaggaataagttagtcctaaatatttcaaaatctaaaagcattgtatttgggacaaatcattcactaaaccctaaacctcttGTCATGAATAATTTGGAAATTTAGCAAATTAAGGAGAATAAATGACTCGGAATAACCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1901338 True 263 lncRNA 0.38 1 10003992 10004254

Neighbor

gene id symbol gene type direction distance location
LOC110498736 LOC106589448 coding upstream 501204 9483623 ~ 9502788 (+)
LOC110499583 NA coding upstream 521693 9476862 ~ 9482299 (+)
LOC110498932 LOC106589450 coding upstream 535653 9440645 ~ 9468339 (+)
LOC118942032 NA coding upstream 538938 9462107 ~ 9465054 (+)
LOC110498931 LOC106589451 coding upstream 573126 9401074 ~ 9430866 (+)
LOC110499584 NA coding downstream 34311 10038565 ~ 10041363 (+)
LOC100305179 gna13 coding downstream 776144 10780398 ~ 10782116 (+)
LOC110499585 NA coding downstream 798473 10802684 ~ 10805251 (+)
LOC110498938 LOC106589439 coding downstream 822510 10826764 ~ 10828429 (+)
LOC110498939 LOC106589440 coding downstream 824964 10829218 ~ 10837113 (+)
G1661390 NA non-coding upstream 10568 9993099 ~ 9993424 (+)
G1660895 NA non-coding upstream 17737 9985479 ~ 9986255 (+)
G1660686 NA non-coding upstream 336556 9664740 ~ 9667436 (+)
G1660645 NA non-coding upstream 440749 9562158 ~ 9563243 (+)
G1660630 NA non-coding upstream 468048 9535695 ~ 9535944 (+)
G1661489 NA non-coding downstream 54269 10058523 ~ 10058930 (+)
G1661520 NA non-coding downstream 71822 10076076 ~ 10076335 (+)
G1661588 NA non-coding downstream 113671 10117925 ~ 10118132 (+)
G1661605 NA non-coding downstream 128387 10132641 ~ 10132983 (+)
G1661612 NA non-coding downstream 134740 10138994 ~ 10139213 (+)
LOC110498922 cssa28h17orf62 other upstream 1476472 8524125 ~ 8527761 (+)
unk LOC106589472 other upstream 1608516 8392044 ~ 8401533 (+)
G1658572 NA other upstream 2298841 7704506 ~ 7705151 (+)
wu:fj29h11 LOC106589505 other upstream 2982908 7015665 ~ 7074332 (+)
G1656720 NA other upstream 4010242 5990474 ~ 5993750 (+)
G1661477 NA other downstream 47368 10051622 ~ 10052089 (+)
G1662037 NA other downstream 471913 10476167 ~ 10476689 (+)
LOC110498940 LOC106589438 other downstream 854901 10850770 ~ 10866995 (+)
G1662536 LOC106589414 other downstream 1300556 11304810 ~ 11306183 (+)

Expression


Co-expression Network