G1661504 (golga7b)



Basic Information


Item Value
gene id G1661504
gene name golga7b
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 10065656 ~ 10065922 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1901435
caacTACCTTGCTCTGGATTTTACTCACCATTATCTTAgattcccctcaggacctgttaaacctgttctactcagctaactccaacctcagtctccacatctGTTTTTTCTTCAAATCATCTGAGCTTCCCCGGATCTGCACTCCATATCTTCCTGTGTAACAATAAATATtttggttcattcatccctgtttcctcatctgagtctgctcttgggttcccctgtgtcGCGCCGCTTAACAGTACGACCTGGCCAAAAGATTAACCC

Function


symbol description
golga7b Enables enzyme binding activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in Golgi membrane. Predicted to be part of palmitoyltransferase complex.

NR:

description
PREDICTED: golgin subfamily A member 7B isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1901435 True 267 lncRNA 0.45 1 10065656 10065922

Neighbor


gene id symbol gene type direction distance location
LOC110498737 ca10 coding downstream 78917 9677900 ~ 9986739 (-)
LOC110498935 LOC106589231 coding downstream 512919 9548938 ~ 9552737 (-)
nme2a LOC106589447 coding downstream 551958 9506374 ~ 9513698 (-)
trnaa-agc-8 NA coding downstream 736514 9329070 ~ 9329142 (-)
pkd1b LOC106589455 coding downstream 754806 9281357 ~ 9310850 (-)
LOC110498936 LOC106589191 coding upstream 543825 10609747 ~ 10668872 (-)
LOC110498937 LOC106589191 coding upstream 637459 10703381 ~ 10704272 (-)
LOC118942033 NA coding upstream 677026 10742948 ~ 10746240 (-)
LOC110498738 NA coding upstream 693059 10758981 ~ 10760570 (-)
LOC110498739 rgs9 coding upstream 697868 10763790 ~ 10780446 (-)
G1661503 NA non-coding downstream 810 10064574 ~ 10064846 (-)
G1661481 NA non-coding downstream 12470 10052860 ~ 10053186 (-)
G1661479 NA non-coding downstream 13222 10052098 ~ 10052434 (-)
G1661478 NA non-coding downstream 13743 10051579 ~ 10051913 (-)
G1661384 NA non-coding downstream 74795 9990648 ~ 9990861 (-)
G1661508 NA non-coding upstream 2396 10068318 ~ 10068535 (-)
G1661517 NA non-coding upstream 7795 10073717 ~ 10074472 (-)
G1661600 NA non-coding upstream 63652 10129574 ~ 10129806 (-)
G1661606 NA non-coding upstream 67039 10132961 ~ 10133249 (-)
G1661650 NA non-coding upstream 97232 10163154 ~ 10163398 (-)
G1661001 LOC106589450 other downstream 605541 9422783 ~ 9460115 (-)
G1661023 NA other downstream 664709 9399117 ~ 9400947 (-)
LOC110498913 h3f3b other downstream 1676402 8386968 ~ 8389308 (-)
LOC110498864 LOC106589517 other downstream 3494201 6568700 ~ 6582912 (-)
G1657869 LOC106589521 other downstream 3556076 6509119 ~ 6509580 (-)
G1662039 NA other upstream 411041 10476963 ~ 10477185 (-)
LOC110498953 NA other upstream 1055991 11121913 ~ 11158776 (-)
G1663264 NA other upstream 1476694 11542616 ~ 11543091 (-)
G1664239 NA other upstream 2184228 12250150 ~ 12251106 (-)
G1665402 LOC106589366 other upstream 3335359 13401281 ~ 13407377 (-)

Expression



Co-expression Network