G1661520


Basic Information

Item Value
gene id G1661520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 10076076 ~ 10076335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1901451
ctgtcgctggaccagacagaacaagcaaaaagtgctcttcactgacgagttgtggttttgtctcaccaggggtgatcgtcggattcgcgtttatcgtcgaaggaatgagcgttacaccgaagcctgtactctggagcgggatcgatttggaggtggagggttcgtcatgatctggggcggtgtgtcacagcatcatcggactgagcttgttgtcattgcaggcaatctcaactctgtgcATTACAGGCAAGACATtctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1901451 True 260 lncRNA 0.52 1 10076076 10076335

Neighbor

gene id symbol gene type direction distance location
LOC110499584 NA coding upstream 34713 10038565 ~ 10041363 (+)
LOC110498736 LOC106589448 coding upstream 573288 9483623 ~ 9502788 (+)
LOC110499583 NA coding upstream 593777 9476862 ~ 9482299 (+)
LOC110498932 LOC106589450 coding upstream 607737 9440645 ~ 9468339 (+)
LOC100305179 gna13 coding downstream 704063 10780398 ~ 10782116 (+)
LOC110499585 NA coding downstream 726392 10802684 ~ 10805251 (+)
LOC110498938 LOC106589439 coding downstream 750429 10826764 ~ 10828429 (+)
LOC110498939 LOC106589440 coding downstream 752883 10829218 ~ 10837113 (+)
LOC110498940 LOC106589438 coding downstream 774435 10850770 ~ 10866995 (+)
G1661489 NA non-coding upstream 17146 10058523 ~ 10058930 (+)
G1661409 NA non-coding upstream 71822 10003992 ~ 10004254 (+)
G1661390 NA non-coding upstream 82652 9993099 ~ 9993424 (+)
G1660895 NA non-coding upstream 89821 9985479 ~ 9986255 (+)
G1660686 NA non-coding upstream 408640 9664740 ~ 9667436 (+)
G1661588 NA non-coding downstream 41590 10117925 ~ 10118132 (+)
G1661605 NA non-coding downstream 56306 10132641 ~ 10132983 (+)
G1661612 NA non-coding downstream 62659 10138994 ~ 10139213 (+)
G1661632 NA non-coding downstream 76398 10152733 ~ 10152949 (+)
G1661641 NA non-coding downstream 80266 10156601 ~ 10156807 (+)
G1661477 NA other upstream 23987 10051622 ~ 10052089 (+)
LOC110498922 cssa28h17orf62 other upstream 1548556 8524125 ~ 8527761 (+)
unk LOC106589472 other upstream 1680600 8392044 ~ 8401533 (+)
G1658572 NA other upstream 2370925 7704506 ~ 7705151 (+)
wu:fj29h11 LOC106589505 other upstream 3054992 7015665 ~ 7074332 (+)
G1662037 NA other downstream 399832 10476167 ~ 10476689 (+)
G1662536 LOC106589414 other downstream 1228475 11304810 ~ 11306183 (+)
LOC110498741 LOC106589412 other downstream 1296532 11372725 ~ 11404820 (+)

Expression


Co-expression Network