G1661588


Basic Information

Item Value
gene id G1661588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 10117925 ~ 10118132 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1901520
gctctagcagggcagaaatttgacaaacagaaaggtgtcatcctatgatggtgccatgttgaaagtcacagaTCTTCTTAAAGACCATtatactaccaatgtttgtctgtgaagattgcatggctgtgttctcgattttatacacttgtcagcaaagggtgtggctgaaatagtcaactctactaatttgaaggagtgtccacatact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1901520 True 208 lncRNA 0.40 1 10117925 10118132

Neighbor

gene id symbol gene type direction distance location
LOC110499584 NA coding upstream 76562 10038565 ~ 10041363 (+)
LOC110498736 LOC106589448 coding upstream 615137 9483623 ~ 9502788 (+)
LOC110499583 NA coding upstream 635626 9476862 ~ 9482299 (+)
LOC110498932 LOC106589450 coding upstream 649586 9440645 ~ 9468339 (+)
LOC100305179 gna13 coding downstream 662266 10780398 ~ 10782116 (+)
LOC110499585 NA coding downstream 684595 10802684 ~ 10805251 (+)
LOC110498938 LOC106589439 coding downstream 708632 10826764 ~ 10828429 (+)
LOC110498939 LOC106589440 coding downstream 711086 10829218 ~ 10837113 (+)
LOC110498940 LOC106589438 coding downstream 732638 10850770 ~ 10866995 (+)
G1661520 NA non-coding upstream 41590 10076076 ~ 10076335 (+)
G1661489 NA non-coding upstream 58995 10058523 ~ 10058930 (+)
G1661409 NA non-coding upstream 113671 10003992 ~ 10004254 (+)
G1661390 NA non-coding upstream 124501 9993099 ~ 9993424 (+)
G1660895 NA non-coding upstream 131670 9985479 ~ 9986255 (+)
G1661605 NA non-coding downstream 14509 10132641 ~ 10132983 (+)
G1661612 NA non-coding downstream 20862 10138994 ~ 10139213 (+)
G1661632 NA non-coding downstream 34601 10152733 ~ 10152949 (+)
G1661641 NA non-coding downstream 38469 10156601 ~ 10156807 (+)
G1661667 NA non-coding downstream 53505 10171637 ~ 10171897 (+)
G1661477 NA other upstream 65836 10051622 ~ 10052089 (+)
LOC110498922 cssa28h17orf62 other upstream 1590405 8524125 ~ 8527761 (+)
unk LOC106589472 other upstream 1722449 8392044 ~ 8401533 (+)
G1658572 NA other upstream 2412774 7704506 ~ 7705151 (+)
wu:fj29h11 LOC106589505 other upstream 3096841 7015665 ~ 7074332 (+)
G1662037 NA other downstream 358035 10476167 ~ 10476689 (+)
G1662536 LOC106589414 other downstream 1186678 11304810 ~ 11306183 (+)
LOC110498741 LOC106589412 other downstream 1254735 11372725 ~ 11404820 (+)

Expression


Co-expression Network