Gene
RNA
| Item | Value |
|---|---|
| gene id | G1662383 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 11069504 ~ 11070255 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1902342 | True | 752 | lncRNA | 0.37 | 1 | 11069504 | 11070255 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498948 | LOC106589430 | coding | upstream | 81671 | 10948832 ~ 10987833 (+) |
| syt15 | LOC106589230 | coding | upstream | 174141 | 10891813 ~ 10895363 (+) |
| LOC110498943 | LOC106589437 | coding | upstream | 195211 | 10871100 ~ 10874293 (+) |
| LOC110498940 | LOC106589438 | coding | upstream | 202509 | 10850770 ~ 10866995 (+) |
| LOC110498939 | LOC106589440 | coding | upstream | 232391 | 10829218 ~ 10837113 (+) |
| gdh03 | gdh03 | coding | downstream | 16867 | 11087122 ~ 11231541 (+) |
| LOC118942035 | NA | coding | downstream | 135168 | 11205423 ~ 11207593 (+) |
| LOC118941993 | LOC106589416 | coding | downstream | 175945 | 11246200 ~ 11247516 (+) |
| LOC118941994 | LOC106589416 | coding | downstream | 193020 | 11263275 ~ 11264589 (+) |
| LOC110498741 | LOC106589412 | coding | downstream | 302470 | 11372725 ~ 11404820 (+) |
| G1662391 | NA | non-coding | upstream | 181 | 11068888 ~ 11069323 (+) |
| G1662371 | NA | non-coding | upstream | 75197 | 10990451 ~ 10994307 (+) |
| G1662385 | NA | non-coding | upstream | 185240 | 10882572 ~ 10884264 (+) |
| G1662363 | rgs9 | non-coding | upstream | 300633 | 10767434 ~ 10768871 (+) |
| G1662362 | NA | non-coding | upstream | 304478 | 10758977 ~ 10765026 (+) |
| G1662518 | NA | non-coding | downstream | 547 | 11070802 ~ 11113378 (+) |
| G1662519 | NA | non-coding | downstream | 920 | 11071175 ~ 11071533 (+) |
| G1662524 | NA | non-coding | downstream | 51811 | 11122066 ~ 11123704 (+) |
| G1662527 | NA | non-coding | downstream | 65260 | 11135515 ~ 11144258 (+) |
| G1662600 | NA | non-coding | downstream | 214748 | 11285003 ~ 11285225 (+) |
| LOC110499585 | NA | other | upstream | 264253 | 10802684 ~ 10805251 (+) |
| G1662037 | NA | other | upstream | 592815 | 10476167 ~ 10476689 (+) |
| G1661477 | NA | other | upstream | 1017415 | 10051622 ~ 10052089 (+) |
| LOC110498922 | cssa28h17orf62 | other | upstream | 2541984 | 8524125 ~ 8527761 (+) |
| G1662536 | LOC106589414 | other | downstream | 234555 | 11304810 ~ 11306183 (+) |
| LOC110498970 | cript | other | downstream | 479541 | 11549728 ~ 11553514 (+) |
| LOC110498999 | LOC106589380 | other | downstream | 1751424 | 12816635 ~ 12836089 (+) |
| LOC110499000 | hecd2 | other | downstream | 1812702 | 12861668 ~ 12895798 (+) |
