Gene
RNA
| Item | Value |
|---|---|
| gene id | G1663314 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 11651964 ~ 11653271 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1903442 | False | 318 | lncRNA | 0.41 | 3 | 11651964 | 11653118 |
| TU1903440 | True | 221 | lncRNA | 0.39 | 3 | 11652502 | 11653271 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fshr | fshr | coding | downstream | 17151 | 11624909 ~ 11634813 (-) |
| LOC110498972 | LOC106589404 | coding | downstream | 32392 | 11603242 ~ 11619572 (-) |
| LOC110498968 | LOC106589406 | coding | downstream | 87040 | 11555259 ~ 11564924 (-) |
| LOC110498969 | pigf | coding | downstream | 102270 | 11547443 ~ 11549694 (-) |
| LOC110498965 | LOC106589409 | coding | downstream | 142699 | 11498540 ~ 11509265 (-) |
| LOC110498976 | LOC106589228 | coding | upstream | 519341 | 12172612 ~ 12174808 (-) |
| LOC110498977 | LOC106589397 | coding | upstream | 525221 | 12178492 ~ 12347526 (-) |
| asah2 | asah2 | coding | upstream | 718303 | 12371574 ~ 12387861 (-) |
| sgms1 | LOC106589394 | coding | upstream | 735112 | 12388383 ~ 12402840 (-) |
| LOC110498983 | LOC106589392 | coding | upstream | 794476 | 12447747 ~ 12458329 (-) |
| G1663311 | NA | non-coding | downstream | 10557 | 11641195 ~ 11641407 (-) |
| G1663266 | NA | non-coding | downstream | 106364 | 11545250 ~ 11545600 (-) |
| G1663265 | NA | non-coding | downstream | 107953 | 11543644 ~ 11544011 (-) |
| G1663261 | NA | non-coding | downstream | 112721 | 11536901 ~ 11539243 (-) |
| G1663319 | NA | non-coding | upstream | 5744 | 11659015 ~ 11659454 (-) |
| G1663338 | NA | non-coding | upstream | 53459 | 11706730 ~ 11712672 (-) |
| G1663339 | NA | non-coding | upstream | 65005 | 11718276 ~ 11718478 (-) |
| G1663341 | NA | non-coding | upstream | 70931 | 11724202 ~ 11724554 (-) |
| G1663346 | NA | non-coding | upstream | 78062 | 11731333 ~ 11731583 (-) |
| G1663264 | NA | other | downstream | 108873 | 11542616 ~ 11543091 (-) |
| LOC110498953 | NA | other | downstream | 493188 | 11121913 ~ 11158776 (-) |
| G1662039 | NA | other | downstream | 1174779 | 10476963 ~ 10477185 (-) |
| G1661001 | LOC106589450 | other | downstream | 2191849 | 9422783 ~ 9460115 (-) |
| G1661023 | NA | other | downstream | 2251017 | 9399117 ~ 9400947 (-) |
| G1664239 | NA | other | upstream | 596879 | 12250150 ~ 12251106 (-) |
| G1665402 | LOC106589366 | other | upstream | 1748010 | 13401281 ~ 13407377 (-) |
| G1666656 | LOC106589183 | other | upstream | 2568928 | 14222199 ~ 14223019 (-) |
| G1666788 | NA | other | upstream | 2771702 | 14424973 ~ 14425314 (-) |
| LOC110499033 | LOC107708254 | other | upstream | 2971084 | 14616546 ~ 14647860 (-) |
