G1664239


Basic Information

Item Value
gene id G1664239
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 12250150 ~ 12251106 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1904421
cctctctctcctccccctctctctggcctCATCAAACATGCCGAATATATGTACTTTCTAAAgaggtctcctctctctcctccccctctctctggcctCATCAAACATGCCGAATATATGTACTTTCTAAAgaggtctcctctctctctctctctctctctctctctctctcctccctctctctctggcctcatcAAACATGCCAAATATATGTACTTTCTAAAgaggtctcctctctctcctccccttctctctggcCTCATCAAACATGCTGAATATATGTACTTTCTAAAgaggtctcctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctccccttcctctctctctggcctcatcAAACATGCCAAATATATGTATTTTCTAAAgaggtctcctctctctctctctctcctccctctctctcttctccctctctctctctctcctccccctctctctctctctccaggctttatacagatctctctctctctctctctctctctctctctctctctctctctctcaattcaattcaattcaagggctttattggcatgggaaacatgtgttaacattgccaaagcaagtgaggtagataatatacaaa
>TU1904423
cctctctctcctccccctctctctggcctCATCAAACATGCCGAATATATGTACTTTCTAAAgaggtctcctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctccaggctttatacagatctctctctctctctctctctctctctctctctctctcaattcaattcaattcaagggctttattggcatgggaaacatgtgttaacattgccaaagcaagtgaggtagataatatacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1904421 False 644 TUCP 0.46 4 12250150 12251106
TU1904423 True 271 lncRNA 0.44 3 12250150 12251106

Neighbor

gene id symbol gene type direction distance location
LOC110498976 LOC106589228 coding downstream 75342 12172612 ~ 12174808 (-)
nrxn1a LOC106589402 coding downstream 534077 11648480 ~ 11716073 (-)
fshr fshr coding downstream 615337 11624909 ~ 11634813 (-)
LOC110498972 LOC106589404 coding downstream 630578 11603242 ~ 11619572 (-)
LOC110498968 LOC106589406 coding downstream 685226 11555259 ~ 11564924 (-)
asah2 asah2 coding upstream 120468 12371574 ~ 12387861 (-)
sgms1 LOC106589394 coding upstream 137277 12388383 ~ 12402840 (-)
LOC110498983 LOC106589392 coding upstream 196641 12447747 ~ 12458329 (-)
LOC110498987 LOC106589389 coding upstream 270769 12521875 ~ 12579704 (-)
LOC110498989 acta2 coding upstream 368360 12619466 ~ 12624986 (-)
G1664183 NA non-coding downstream 72356 12177492 ~ 12177794 (-)
G1663743 NA non-coding downstream 247181 11998179 ~ 12002969 (-)
G1663658 NA non-coding downstream 384340 11865501 ~ 11865810 (-)
G1663462 NA non-coding downstream 395746 11854154 ~ 11854404 (-)
G1663461 NA non-coding downstream 396455 11853457 ~ 11853695 (-)
G1664327 NA non-coding upstream 123736 12374842 ~ 12395874 (-)
G1664361 LOC106589393 non-coding upstream 183313 12434419 ~ 12435431 (-)
G1664375 NA non-coding upstream 213926 12465032 ~ 12465465 (-)
G1664441 NA non-coding upstream 296128 12547234 ~ 12547507 (-)
G1664454 NA non-coding upstream 313197 12564303 ~ 12564528 (-)
G1663264 NA other downstream 707059 11542616 ~ 11543091 (-)
LOC110498953 NA other downstream 1091374 11121913 ~ 11158776 (-)
G1662039 NA other downstream 1772965 10476963 ~ 10477185 (-)
G1661001 LOC106589450 other downstream 2790035 9422783 ~ 9460115 (-)
G1661023 NA other downstream 2849203 9399117 ~ 9400947 (-)
G1665402 LOC106589366 other upstream 1150175 13401281 ~ 13407377 (-)
G1666656 LOC106589183 other upstream 1971093 14222199 ~ 14223019 (-)
G1666788 NA other upstream 2173867 14424973 ~ 14425314 (-)
LOC110499033 LOC107708254 other upstream 2373249 14616546 ~ 14647860 (-)
G1667100 LOC106589344 other upstream 2639269 14890375 ~ 14897681 (-)

Expression


Co-expression Network