G1664854 (LOC105025155)


Basic Information

Item Value
gene id G1664854
gene name LOC105025155
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 12986168 ~ 12986802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1905090
GTGTaatctttttattttattatctTCAACTCAATTACTTGGGGTTTGTACCAATGCTTTTATGTACACTGATATGCCCGAATATTGCACACTATAAAACCATCGGCAAATCAGAATATAGGGATAATAACTGCCCTTTTGTAGATCAAACATAAAAAAGACACAAAGTGAGCAAAATGTAGACTTGTTTCACAGATCCTCAACTTGACCTGGAATCACATAACACTCACTGGGTCCAGTTGAGGGGAAAGGCATCATATCTAATGATATTTCTGCTTCACATTCAAGCTGCAGTATTGCAGGCAGGATAATGTTTCTTTGGTTACGTGAGGTATTAGAGACAACGGAGACTTTGTCAAATGGTAGGTCCAAATCTTCCCCGTGTGAGACCATGGGCAGGCGTTGCGCACAATGCGCAGAGGCATTGATAGTTGCGTTCTGGAACGTAGTGTCGTGGCGGTAAGACATCAACTCGTTACTTAAATGGACAGCTTCTACAGAACTGGAACAGTATCTTTTGCAGCCCAGAATGGTGGAGAATGCTTTTCTGAAATCAGCATTAAAAGCGTATATGACTGGGTTTAACGAAGAGTTTGCCCATCCAAACCACACAAACATGTTAAACGTGGTGTTAC

Function

NR:

description
D(5)-like dopamine receptor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1905090 True 635 lncRNA 0.41 1 12986168 12986802
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110499002 tnks2 coding upstream 10472 12959881 ~ 12975696 (+)
LOC110499000 hecd2 coding upstream 90370 12861668 ~ 12895798 (+)
LOC110498999 LOC106589380 coding upstream 152703 12816635 ~ 12836089 (+)
LOC110498997 LOC106589383 coding upstream 180666 12801378 ~ 12805502 (+)
rpp30 rpp30 coding upstream 184816 12798774 ~ 12801352 (+)
LOC110499004 tbc1d12 coding downstream 23074 13009876 ~ 13027716 (+)
noc3l noc3l coding downstream 43329 13030131 ~ 13050931 (+)
fra10ac1 fra10ac1 coding downstream 204647 13191449 ~ 13207273 (+)
rbp4 rbp coding downstream 259772 13246574 ~ 13248412 (+)
LOC110499012 myof coding downstream 286450 13273252 ~ 13297836 (+)
G1664850 NA non-coding upstream 2147 12983769 ~ 12984021 (+)
G1664694 NA non-coding upstream 3484 12982378 ~ 12982684 (+)
G1664653 NA non-coding upstream 7885 12977505 ~ 12978283 (+)
G1664689 NA non-coding upstream 27442 12958238 ~ 12958726 (+)
G1664675 NA non-coding upstream 49087 12936882 ~ 12937081 (+)
G1664868 NA non-coding downstream 14749 13001551 ~ 13002079 (+)
G1664869 NA non-coding downstream 19543 13006345 ~ 13006551 (+)
G1664867 NA non-coding downstream 42315 13029117 ~ 13029974 (+)
G1664899 LOC106578971 non-coding downstream 87054 13073856 ~ 13075703 (+)
G1664966 LOC106578978 non-coding downstream 160973 13147775 ~ 13152082 (+)
LOC110498970 cript other upstream 1433002 11549728 ~ 11553514 (+)
LOC110498741 LOC106589412 other upstream 1606506 11372725 ~ 11404820 (+)
G1662536 LOC106589414 other upstream 1679985 11304810 ~ 11306183 (+)
G1665637 LOC106589364 other downstream 682370 13669172 ~ 13672001 (+)
G1666194 NA other downstream 1614519 14601321 ~ 14624214 (+)
G1666308 NA other downstream 1798790 14785592 ~ 14785920 (+)
G1667601 NA other downstream 2352810 15339612 ~ 15341184 (+)
LOC110499057 LOC106589330 other downstream 3147668 16134445 ~ 16135964 (+)

Expression

G1664854(LOC105025155) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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G1664854(LOC105025155) Expression in each Bioproject

Bar chart with 4 bars.
G1664854(LOC105025155) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
End of interactive chart.

Co-expression Network