G1665270


Basic Information

Item Value
gene id G1665270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 13206417 ~ 13207262 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1905581
AACTCTTTAATTGGGTAAATAGGGCACATTTATTAGCACAAAGAAACACCGATCAAAGTAGAATGTGTACTATGGTCGACTTCCTCTTTAACGCATGATAACCGTTCATGCAGGTTAACTCACTATCTGTGGACTCCTTTAGAAAGAAGAGAGAGTAATTACTGAAGATTAAAGCCATTGTGTCTAATCCCCGGGCAATGGACACGCATCTGAACTTCCTGACGAAAAGAGCACACGGGCCACTTCAGGCATAATTCACAGCTTCCAAATCGTAGCGCTACAGCATCGAACATTGGTTTGGACATCTATAACCCTATAGACAGAACATTGGTTTGGACATCTATAACCCTATAGACAGAACATTGGTTTGGACATCTATAACCCTATAGACAGAACATTGGTTTGGACATCTATAACCCTATAGACAGAACATTGGTCAACTATAACCCTACAGGAAGAACATTAACAATGCATTGGCTTTTATTTGGTCTCTCTACTACCATGGTTGAATGTTTTGCTTCATCTAGTTCTTCTGATATTGATCTTTCTTGGCAGTTCTTCGTGGTTTTACATGGCACTCTATGCATATCGTAGTCTTTATttcagttgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaagattttattTAGCTTCAGATAAACTCAAATATTCAACGAGGACAACTTCTAACACCAAATCAATAACATCAATGTCTGGACTCTTGCTGGCAGAAATCCAAGGTCAGGGTGGTCAAAGAAACATGTCCTCAAAGTACTCGTCAAACTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1905581 True 790 lncRNA 0.38 2 13206417 13207262

Neighbor

gene id symbol gene type direction distance location
LOC110499008 lgi1 coding downstream 35717 13157784 ~ 13170700 (-)
slc35g1 slc35g1 coding downstream 49310 13149521 ~ 13157107 (-)
plce1 plce1 coding downstream 69028 13056633 ~ 13137389 (-)
LOC110499003 LOC105025155 coding downstream 218427 12985415 ~ 12987990 (-)
LOC110499001 LOC106589379 coding downstream 257952 12944394 ~ 12948465 (-)
pde6c LOC106589370 coding upstream 505 13207767 ~ 13252579 (-)
cep55l cep55 coding upstream 50071 13257333 ~ 13272310 (-)
LOC110498744 NA coding upstream 98928 13306190 ~ 13309377 (-)
LOC118942003 NA coding upstream 335559 13542821 ~ 13550848 (-)
LOC110499015 LOC106589364 coding upstream 461675 13668937 ~ 14093823 (-)
G1665264 NA non-coding downstream 19750 13186415 ~ 13186667 (-)
G1665189 NA non-coding downstream 125381 13049344 ~ 13081036 (-)
G1665188 NA non-coding downstream 175423 13030037 ~ 13030994 (-)
G1665184 NA non-coding downstream 176665 13029118 ~ 13029752 (-)
G1665168 NA non-coding downstream 199885 13006318 ~ 13006532 (-)
G1665263 rbp non-coding upstream 33220 13240482 ~ 13248413 (-)
G1665406 NA non-coding upstream 205771 13413033 ~ 13413348 (-)
G1665407 NA non-coding upstream 207665 13414927 ~ 13415231 (-)
G1665419 NA non-coding upstream 223445 13430707 ~ 13431621 (-)
G1664239 NA other downstream 955311 12250150 ~ 12251106 (-)
G1663264 NA other downstream 1663326 11542616 ~ 11543091 (-)
LOC110498953 NA other downstream 2047641 11121913 ~ 11158776 (-)
G1662039 NA other downstream 2729232 10476963 ~ 10477185 (-)
G1661001 LOC106589450 other downstream 3746302 9422783 ~ 9460115 (-)
G1665402 LOC106589366 other upstream 194019 13401281 ~ 13407377 (-)
G1666656 LOC106589183 other upstream 1014937 14222199 ~ 14223019 (-)
G1666788 NA other upstream 1217711 14424973 ~ 14425314 (-)
LOC110499033 LOC107708254 other upstream 1417093 14616546 ~ 14647860 (-)
G1667100 LOC106589344 other upstream 1683113 14890375 ~ 14897681 (-)

Expression


Co-expression Network