G1668935


Basic Information

Item Value
gene id G1668935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16648224 ~ 16648455 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1909517
ATTGACAGTAAACCAACATCCCCAAAAATATGCTCTCATCAACAGTGACTGGATGTGTATGTACGAAGTAAACATCCCTTTCGTAAATGTGGACTTACAAACAATCTCTGACTACATAAACATCCCTAATTGAACGGGCATGTGTGTTTCACCTTGGACTGGATGTGTAAACAACATGCATGCATAAATCCGACAAAAGAGTGGATGTCTAATCGAGTACACGAGGTTACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1909517 True 232 lncRNA 0.40 1 16648224 16648455

Neighbor

gene id symbol gene type direction distance location
grb7 LOC106589320 coding upstream 11054 16621771 ~ 16637170 (+)
LOC110499062 arf1l coding upstream 37008 16605051 ~ 16611216 (+)
LOC110499061 grn coding upstream 55577 16560848 ~ 16592647 (+)
LOC110499586 LOC106589323 coding upstream 103220 16540942 ~ 16545004 (+)
LOC110498755 LOC106589324 coding upstream 107787 16535724 ~ 16540437 (+)
LOC110498756 LOC106589319 coding downstream 9036 16657491 ~ 16706241 (+)
LOC100135885 LOC106589306 coding downstream 141358 16789813 ~ 16795054 (+)
LOC110499066 LOC106589302 coding downstream 164659 16813114 ~ 16822670 (+)
LOC110499069 LOC106589311 coding downstream 176031 16824486 ~ 16840335 (+)
LOC110499071 arl4d coding downstream 198995 16847450 ~ 16849896 (+)
G1668930 NA non-coding upstream 9297 16638537 ~ 16638927 (+)
G1668926 yo84 non-coding upstream 29541 16618412 ~ 16618683 (+)
G1668923 NA non-coding upstream 32209 16615800 ~ 16616015 (+)
G1668867 NA non-coding upstream 33255 16614736 ~ 16614969 (+)
G1668860 NA non-coding upstream 99554 16547383 ~ 16548670 (+)
G1668936 NA non-coding downstream 3906 16652361 ~ 16652575 (+)
G1668937 NA non-coding downstream 5336 16653791 ~ 16654096 (+)
G1669019 NA non-coding downstream 147700 16796155 ~ 16797220 (+)
G1669022 NA non-coding downstream 153098 16801553 ~ 16801752 (+)
LOC110499058 LOC106589328 other upstream 342003 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 512457 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1307040 15339612 ~ 15341184 (+)
G1666308 NA other upstream 1862304 14785592 ~ 14785920 (+)
LOC118941995 LOC105021261 other downstream 805032 17453487 ~ 17457043 (+)
G1670091 NA other downstream 924376 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 1068581 17717036 ~ 17812707 (+)
G1670129 NA other downstream 1103839 17752294 ~ 17760812 (+)

Expression


Co-expression Network