G1669019


Basic Information

Item Value
gene id G1669019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16796155 ~ 16797220 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1909609
cgcttaccatgctctcgtgcatgcttcagtgttgcttgtctcgaagcgagcataaaaggcatttagctcatctggtaggctcacgtctgggtttccctttgtagtccgtaatagttttcaagccctgccacatatgacgagcatcagagccggtgtagtaggattcaatcttaattctgtattgacgctttggtTGTTTGATgattcgtctgagggcatagcgggatttcttataagcgtccggattagtttcccgttccttgaaagtggcagctctagcctttagcttgatgcggatgttgcctgtaatccatggcttctggttgggatatgcatgtacagtcactgtggggatgatgtcatcgacGTGTATTTCTCggtgccattggatgaatcccggaacatattccagtctttgctagcaaaacagtcctgtagtgtagcatccgcgtcatctgaccacttccgttttgagcgagtcactggtacttcctgctttagtttttgcttgtaagcaggaatcaggaggatatagttatggtcagatttgccaaatggaagacGGGGGAGAGCGGTGTATGcatctctctgtgtggagtaaaggtggtctatgattttttccccccctggttgcacatgtgatatgctggtaaaaatttggtcaGAAGCGGTCTTCGTGCCAGCTTcattttgtggtggtaaatagacggctacgagtaatacagatgagaaatctcttggtagataatgtggtctgtatcttatcataaggtactctagctcaggcgagcaatacctcgagacttctttaatattagacattgcgcaccagctgttattaccagaggtagcgtctctgttttgctggtgcatggaaaatccctcTAGCTCTATGTTGTCCGTatcttcgttcagccacgtctcggtgaaacataagatgttacagtttttaatgtccccttggtaggataataagttaataagtttaaaaaataagttacacaaaatgccaaaaaaataacaaaattgcacaattggttgggagaatgtaaaacgtgTTCTTCGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1909609 True 1066 lncRNA 0.44 1 16796155 16797220

Neighbor

gene id symbol gene type direction distance location
LOC100135885 LOC106589306 coding upstream 1101 16789813 ~ 16795054 (+)
LOC110498756 LOC106589319 coding upstream 89914 16657491 ~ 16706241 (+)
grb7 LOC106589320 coding upstream 158985 16621771 ~ 16637170 (+)
LOC110499062 arf1l coding upstream 184939 16605051 ~ 16611216 (+)
LOC110499061 grn coding upstream 203508 16560848 ~ 16592647 (+)
LOC110499066 LOC106589302 coding downstream 15894 16813114 ~ 16822670 (+)
LOC110499069 LOC106589311 coding downstream 27266 16824486 ~ 16840335 (+)
LOC110499071 arl4d coding downstream 50230 16847450 ~ 16849896 (+)
LOC110499072 sost coding downstream 80231 16877451 ~ 16920896 (+)
LOC118942005 LOC106589179 coding downstream 204494 17001714 ~ 17006377 (+)
G1668937 NA non-coding upstream 142059 16653791 ~ 16654096 (+)
G1668936 NA non-coding upstream 143580 16652361 ~ 16652575 (+)
G1668935 NA non-coding upstream 147700 16648224 ~ 16648455 (+)
G1668930 NA non-coding upstream 157228 16638537 ~ 16638927 (+)
G1669022 NA non-coding downstream 4333 16801553 ~ 16801752 (+)
G1669029 NA non-coding downstream 47033 16844253 ~ 16844591 (+)
G1669054 LOC100194703 non-coding downstream 83052 16880272 ~ 16880602 (+)
G1669056 NA non-coding downstream 84708 16881928 ~ 16882141 (+)
LOC110498755 LOC106589324 other upstream 255718 16535724 ~ 16540437 (+)
LOC110499058 LOC106589328 other upstream 489934 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 660388 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1454971 15339612 ~ 15341184 (+)
LOC118941995 LOC105021261 other downstream 656267 17453487 ~ 17457043 (+)
G1670091 NA other downstream 775611 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 919816 17717036 ~ 17812707 (+)
G1670129 NA other downstream 955074 17752294 ~ 17760812 (+)
G1670126 NA other downstream 970261 17767481 ~ 17773702 (+)

Expression


Co-expression Network