Gene
RNA
| Item | Value |
|---|---|
| gene id | G1669408 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 16882839 ~ 16883109 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1910028 | True | 271 | lncRNA | 0.41 | 1 | 16882839 | 16883109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psme3 | LOC106589310 | coding | downstream | 69756 | 16805888 ~ 16813083 (-) |
| LOC110499065 | LOC106589305 | coding | downstream | 93619 | 16784825 ~ 16789220 (-) |
| LOC110499587 | LOC106589313 | coding | downstream | 104566 | 16776151 ~ 16778273 (-) |
| LOC110498757 | LOC106589318 | coding | downstream | 109150 | 16699815 ~ 16773689 (-) |
| LOC110499077 | tmem204 | coding | upstream | 356756 | 17239865 ~ 17254491 (-) |
| LOC110499076 | LOC106578246 | coding | upstream | 391341 | 17274450 ~ 17285270 (-) |
| LOC118942041 | LOC106611593 | coding | upstream | 463057 | 17346166 ~ 17350460 (-) |
| LOC118942007 | LOC106578245 | coding | upstream | 476545 | 17359654 ~ 17362598 (-) |
| LOC110499078 | LOC106578245 | coding | upstream | 484060 | 17367169 ~ 17374315 (-) |
| G1669407 | NA | non-coding | downstream | 632 | 16881952 ~ 16882207 (-) |
| G1669405 | NA | non-coding | downstream | 2738 | 16879900 ~ 16880101 (-) |
| G1669402 | NA | non-coding | downstream | 5015 | 16877438 ~ 16877824 (-) |
| G1669380 | NA | non-coding | downstream | 38130 | 16844510 ~ 16844709 (-) |
| G1669365 | NA | non-coding | downstream | 77941 | 16804466 ~ 16804898 (-) |
| G1669409 | NA | non-coding | upstream | 84 | 16883193 ~ 16883423 (-) |
| G1669415 | LOC106589308 | non-coding | upstream | 4723 | 16887832 ~ 16888065 (-) |
| G1669416 | NA | non-coding | upstream | 5477 | 16888586 ~ 16888806 (-) |
| G1669418 | NA | non-coding | upstream | 8016 | 16891125 ~ 16891404 (-) |
| G1669420 | NA | non-coding | upstream | 11798 | 16894907 ~ 16895622 (-) |
| G1669343 | LOC106589306 | other | downstream | 87584 | 16754026 ~ 16795255 (-) |
| LOC110499060 | LOC106589322 | other | downstream | 333707 | 16547347 ~ 16560741 (-) |
| G1668767 | NA | other | downstream | 545105 | 16337276 ~ 16337734 (-) |
| LOC110498751 | LOC106589337 | other | downstream | 1237914 | 15636400 ~ 15680564 (-) |
| LOC110498749 | s39ab | other | downstream | 1306148 | 15421293 ~ 15577049 (-) |
| G1669974 | NA | other | upstream | 386674 | 17269783 ~ 17270148 (-) |
| LOC110498759 | NA | other | upstream | 545506 | 17428615 ~ 17434040 (-) |
| LOC110498760 | stub1 | other | upstream | 559481 | 17442590 ~ 17452727 (-) |
| G1670109 | LOC105007702 | other | upstream | 713506 | 17596615 ~ 17625448 (-) |
| G1670145 | NA | other | upstream | 802867 | 17685976 ~ 17691866 (-) |
