G1669683


Basic Information

Item Value
gene id G1669683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 17328520 ~ 17386920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1910312
gatgtcaattagcccatcagaagcttctaaagccatgacatcattttctggaattttccaagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgacccactggaattgtgatactgtgaattataagtgaaataatctgtctctaaacaattgttggaaaaattacttgtgtcatgcacaacgtagatgttgtaaccgacttgccaaaagtatagtttgttaacaagaaatttgtggagtggttgaagaacgagttttaatgactccaacctaagtgtatgtaaacttccgacttcaactgta

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1910312 True 312 lncRNA 0.36 2 17328520 17386920

Neighbor

gene id symbol gene type direction distance location
LOC118942006 NA coding upstream 10426 17317362 ~ 17318094 (+)
LOC118942040 ift140 coding upstream 108656 17205286 ~ 17219864 (+)
telo2 telo2 coding upstream 123863 17187723 ~ 17204657 (+)
LOC110499073 LOC106578252 coding upstream 151578 17052162 ~ 17176942 (+)
LOC118942005 LOC106589179 coding upstream 322143 17001714 ~ 17006377 (+)
LOC118941995 LOC105021261 coding downstream 66609 17453487 ~ 17457043 (+)
LOC118942008 LOC105021261 coding downstream 74517 17461437 ~ 17464981 (+)
LOC110515779 LOC105021261 coding downstream 82449 17469369 ~ 17472887 (+)
LOC118941996 LOC105021261 coding downstream 89493 17476413 ~ 17479931 (+)
LOC118942042 LOC105021261 coding downstream 97404 17484324 ~ 17495741 (+)
G1669726 NA non-coding upstream 19621 17308681 ~ 17308899 (+)
G1669723 NA non-coding upstream 25714 17302478 ~ 17302806 (+)
G1669719 NA non-coding upstream 28769 17299520 ~ 17299751 (+)
G1669702 NA non-coding upstream 53572 17274727 ~ 17274948 (+)
G1670085 NA non-coding downstream 155293 17542213 ~ 17542468 (+)
G1670086 NA non-coding downstream 170135 17557055 ~ 17561682 (+)
G1670088 NA non-coding downstream 184462 17571382 ~ 17571653 (+)
G1670094 NA non-coding downstream 193733 17580653 ~ 17605720 (+)
LOC118942045 NA non-coding downstream 220361 17607281 ~ 17615450 (+)
LOC110498756 LOC106589319 other upstream 642425 16657491 ~ 16706241 (+)
LOC110498755 LOC106589324 other upstream 788083 16535724 ~ 16540437 (+)
LOC110499058 LOC106589328 other upstream 1022299 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 1192753 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1987336 15339612 ~ 15341184 (+)
G1670091 NA other downstream 185911 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 330116 17717036 ~ 17812707 (+)
G1670129 NA other downstream 365374 17752294 ~ 17760812 (+)
G1670126 NA other downstream 380561 17767481 ~ 17773702 (+)

Expression


Co-expression Network