G1670086


Basic Information

Item Value
gene id G1670086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 17557055 ~ 17561682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1910777
ctgaactttggagacgacatcccgagtgccctgcgggtcgctaagaagaagcgctggaatagcattgaggagaagcgcatcaaccaggagaacaagctgcatgcatatctcaccaaacttatcctagcagagaaggagagtttgtgagaagacaaagaacagggccattctttcacctgacagctagccagccggagagactgggaacaggatagggaaacagtgcgcagcgtGCGCtggagagccaccagagaagatggctagcagcccagagaagagttccacagcacaggagctgaaggagcagggcaaccgactgttcctctgccgcaagtaccaggaagctgccacctgctacagcaaaaccata

Function

NR:

description
STIP1 homology and U box-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1910777 True 370 lncRNA 0.54 2 17557055 17561682

Neighbor

gene id symbol gene type direction distance location
LOC118942042 LOC105021261 coding upstream 61314 17484324 ~ 17495741 (+)
LOC118941996 LOC105021261 coding upstream 77124 17476413 ~ 17479931 (+)
LOC110515779 LOC105021261 coding upstream 84168 17469369 ~ 17472887 (+)
LOC118942008 LOC105021261 coding upstream 92074 17461437 ~ 17464981 (+)
LOC118941995 LOC105021261 coding upstream 100012 17453487 ~ 17457043 (+)
LOC118942043 NA coding downstream 18908 17580590 ~ 17587187 (+)
LOC118942044 NA coding downstream 38447 17600129 ~ 17605166 (+)
LOC118942045 NA coding downstream 48731 17607281 ~ 17615450 (+)
LOC118942046 NA coding downstream 276411 17838093 ~ 17843090 (+)
LOC110499153 LOC106589263 coding downstream 1533200 19094882 ~ 19201695 (+)
G1670085 NA non-coding upstream 14587 17542213 ~ 17542468 (+)
G1669683 NA non-coding upstream 170135 17328520 ~ 17386920 (+)
G1669755 NA non-coding upstream 189368 17359796 ~ 17367687 (+)
LOC118942006 NA non-coding upstream 239116 17317362 ~ 17318094 (+)
G1669726 NA non-coding upstream 248156 17308681 ~ 17308899 (+)
G1670088 NA non-coding downstream 9700 17571382 ~ 17571653 (+)
G1670094 NA non-coding downstream 18971 17580653 ~ 17605720 (+)
G1670114 NA non-coding downstream 124242 17685924 ~ 17691465 (+)
G1670116 NA non-coding downstream 126355 17688037 ~ 17693706 (+)
LOC110498756 LOC106589319 other upstream 870960 16657491 ~ 16706241 (+)
LOC110498755 LOC106589324 other upstream 1016618 16535724 ~ 16540437 (+)
LOC110499058 LOC106589328 other upstream 1250834 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 1421288 16134445 ~ 16135964 (+)
G1670091 NA other downstream 11149 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 155354 17717036 ~ 17812707 (+)
G1670129 NA other downstream 190612 17752294 ~ 17760812 (+)
G1670126 NA other downstream 205799 17767481 ~ 17773702 (+)
G1670209 LOC105007702 other downstream 489929 18051611 ~ 18132470 (+)

Expression


Co-expression Network