G1670140


Basic Information

Item Value
gene id G1670140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 17741411 ~ 17763163 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1910878
ctgggtatagttagaatgttgacagcattataaattgcactcgacccaatactgcacatctacagtgcattcagaaagtattcagaccccttcactttttccacattgttatgttacagcgtaactaacaatatattaatacatttttcccctcaatctacacacaacaccccataatgacacaacaaaaacaggtttagaaatgtttgcaaaaacagaaataccttatttacataagtattcagaccatttgctatgatactggaaattgagctgtgcatcatgtttccattgatcatccttgaggtagttctacaacttgaaggcctctcagacatgagaaacaatattttctgggctgatgaaaccaagattacacactgggacatgccgtgccattatgcagaattttattgtacggccttttaacttgcagggatggacactcctgaatgtcttaattataggctaccccgactttgtctcctatttctatcatgttaaatattaaccactatcagtatcgactgtgagtaggcataataataacacttattcaactgccaatttactattagttcccttcaataacctaacctaagtttggtttacctttatttgcttcctctgtaaacgccgtcacggccatgtggctattgctaaggatcattagtaacaattgataacataataaaaggctaattaaatcgtttatggagcggaacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1910878 True 727 lncRNA 0.37 2 17741411 17763163

Neighbor

gene id symbol gene type direction distance location
LOC110498760 stub1 coding downstream 288690 17442590 ~ 17452727 (-)
LOC110498759 NA coding downstream 310355 17428615 ~ 17434040 (-)
LOC110499078 LOC106578245 coding downstream 367096 17367169 ~ 17374315 (-)
LOC118942007 LOC106578245 coding downstream 378813 17359654 ~ 17362598 (-)
LOC118942041 LOC106611593 coding downstream 390951 17346166 ~ 17350460 (-)
LOC110512504 NA coding upstream 610612 18373775 ~ 18381647 (-)
LOC118942047 NA coding upstream 620702 18383865 ~ 18384458 (-)
LOC110498770 LOC106589258 coding upstream 990931 18754094 ~ 18887492 (-)
LOC110499157 LOC106589261 coding upstream 1126907 18890070 ~ 19003867 (-)
LOC110499154 LOC106589262 coding upstream 1290963 19054126 ~ 19095333 (-)
G1670139 LOC105007702 non-coding downstream 30144 17699374 ~ 17711267 (-)
G1670112 NA non-coding downstream 92777 17648360 ~ 17648634 (-)
G1670104 NA non-coding downstream 133510 17588241 ~ 17607901 (-)
G1670090 NA non-coding downstream 169091 17571928 ~ 17572320 (-)
G1670089 NA non-coding downstream 169655 17571417 ~ 17571756 (-)
G1670144 stub1 non-coding upstream 5175 17768338 ~ 17775909 (-)
G1670153 NA non-coding upstream 7544 17770707 ~ 17777837 (-)
G1670166 NA non-coding upstream 60675 17823838 ~ 17856746 (-)
G1670172 NA non-coding upstream 125111 17888274 ~ 17896403 (-)
G1671479 NA non-coding upstream 262639 18025802 ~ 18031219 (-)
G1670142 NA other downstream 46827 17687735 ~ 17694584 (-)
G1670145 NA other downstream 49545 17685976 ~ 17691866 (-)
G1670109 LOC105007702 other downstream 115963 17596615 ~ 17625448 (-)
G1671478 NA other upstream 259281 18022444 ~ 18032842 (-)
G1671549 NA other upstream 637189 18400352 ~ 18406596 (-)
G1671550 NA other upstream 645961 18409124 ~ 18415464 (-)
G1671578 NA other upstream 802707 18565870 ~ 18624587 (-)
G1671580 NA other upstream 830890 18594053 ~ 18642884 (-)

Expression


Co-expression Network