G1670208


Basic Information

Item Value
gene id G1670208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18050062 ~ 18050619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1910969
gcgcttataaacgcagggtcgttacagtattttatcagcaaaacataatttcctaaatatttcaaacacttgatgttaacatgatgtaatatgaccttgaggcaatttctaccataaaactactaatggtaaggattggttttggggtattggtaacttttttgttattgaatcttacctcgcggtgctccgtcgtatatccgacgtcagcatgacaacaaactagctagctcttagctctctgttatagtatagttacagttcaatgggaaaagcaaatcaattaagacttgaaattgaaatatactggcacatcaatcgtctgtatatgaaattctTTCGAAcgggtgaggttaaagatgtttgtttttgtgtgtagttcaccactaatcggtagctaggtaacgttagtttaataaccgacatttgagctaggctagctgttagctaacgcttgactttgtcatcatgagataacgttacattagacatacatgtggctaaatcattgggtgaagaggcgtattctggagggggagttctgaacattaaacaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1910969 True 558 lncRNA 0.37 1 18050062 18050619

Neighbor

gene id symbol gene type direction distance location
LOC118942046 NA coding upstream 206972 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 434612 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 444896 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 462875 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 554321 17484324 ~ 17495741 (+)
LOC110499153 LOC106589263 coding downstream 1044263 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 1156633 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 1244504 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 1260751 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 1325620 19376239 ~ 19378591 (+)
G1670174 NA non-coding upstream 43603 18006245 ~ 18006459 (+)
G1670159 NA non-coding upstream 217011 17828766 ~ 17833051 (+)
G1670158 NA non-coding upstream 233570 17816179 ~ 17816492 (+)
G1670125 LOC105007702 non-coding upstream 237355 17717036 ~ 17812707 (+)
G1670209 LOC105007702 non-coding downstream 24481 18051611 ~ 18132470 (+)
G1670215 NA non-coding downstream 32863 18083482 ~ 18089617 (+)
G1670216 NA non-coding downstream 49534 18100153 ~ 18108413 (+)
G1670210 NA non-coding downstream 54324 18104943 ~ 18172711 (+)
G1670233 LOC105021261 non-coding downstream 113165 18163784 ~ 18223302 (+)
G1670126 NA other upstream 276360 17767481 ~ 17773702 (+)
G1670129 NA other upstream 289250 17752294 ~ 17760812 (+)
G1670091 NA other upstream 472800 17572831 ~ 17577262 (+)
LOC118941995 LOC105021261 other upstream 595968 17453487 ~ 17457043 (+)
G1671091 NA other downstream 2177176 20227795 ~ 20228168 (+)
G1672918 NA other downstream 3038784 21089403 ~ 21089830 (+)
G1672973 NA other downstream 3089906 21140525 ~ 21191078 (+)

Expression


Co-expression Network