G1671511


Basic Information

Item Value
gene id G1671511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18138186 ~ 18144231 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912446
gtactgaaaaccctattgaataaaaactccacgagaacatctgttggccagccagtgggaaggtttctagcagttcaattacacttatttggcgtgcgcaagtgaaccacgcctacaaagcctgttacgcaccttaataaggttactctgaataccaactactaaaaagtatataggaaaggcgtaatttcctaaatcggacccttagtgaatacaggcccaaacttaatctgtgtctaggaaactggccttgagggttggtcctgacctctctgcaggttgccgatggcctcgttgtagttctccagctccaggtgacactggcacaggaagaagtgggctttgacagaatgggggtccagttccagcgcgtgcttgcagtccgccagggctttgtcgttctgcttgcagcttcacttggcacagagtacggttggtgtagtacaccgccactgaggggttacggttctgttggcaagatgtatacacacacacacacacaggtgcaaccacgcacgttacatattgcacaagctatttttgtaagagtgcatcagaccaagctacttctattctgacatctattcagagtaggtgaataggacagtgtcaatatctcatatcatatagactttcagtcat

Function

NR:

description
E3 ubiquitin-protein ligase CHIP-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912446 True 642 lncRNA 0.47 2 18138186 18144231

Neighbor

gene id symbol gene type direction distance location
LOC110498760 stub1 coding downstream 685465 17442590 ~ 17452727 (-)
LOC110498759 NA coding downstream 707130 17428615 ~ 17434040 (-)
LOC110499078 LOC106578245 coding downstream 763871 17367169 ~ 17374315 (-)
LOC118942007 LOC106578245 coding downstream 775588 17359654 ~ 17362598 (-)
LOC118942041 LOC106611593 coding downstream 787726 17346166 ~ 17350460 (-)
LOC110512504 NA coding upstream 229544 18373775 ~ 18381647 (-)
LOC118942047 NA coding upstream 239634 18383865 ~ 18384458 (-)
LOC110498770 LOC106589258 coding upstream 609863 18754094 ~ 18887492 (-)
LOC110499157 LOC106589261 coding upstream 745839 18890070 ~ 19003867 (-)
LOC110499154 LOC106589262 coding upstream 909895 19054126 ~ 19095333 (-)
G1671489 NA non-coding downstream 667 18118813 ~ 18137519 (-)
G1671505 NA non-coding downstream 9243 18122259 ~ 18128943 (-)
G1671504 NA non-coding downstream 16628 18115654 ~ 18121558 (-)
G1671499 NA non-coding downstream 34329 18095514 ~ 18103857 (-)
G1671498 NA non-coding downstream 35102 18094686 ~ 18103084 (-)
G1671526 NA non-coding upstream 71005 18215236 ~ 18221419 (-)
G1671531 NA non-coding upstream 176876 18321107 ~ 18324604 (-)
G1671538 NA non-coding upstream 187757 18331988 ~ 18332237 (-)
G1671540 NA non-coding upstream 203100 18347331 ~ 18350834 (-)
G1671541 NA non-coding upstream 206640 18350871 ~ 18369173 (-)
G1671478 NA other downstream 105344 18022444 ~ 18032842 (-)
G1670142 NA other downstream 443602 17687735 ~ 17694584 (-)
G1670145 NA other downstream 446320 17685976 ~ 17691866 (-)
G1670109 LOC105007702 other downstream 512738 17596615 ~ 17625448 (-)
G1671549 NA other upstream 256121 18400352 ~ 18406596 (-)
G1671550 NA other upstream 264893 18409124 ~ 18415464 (-)
G1671578 NA other upstream 421639 18565870 ~ 18624587 (-)
G1671580 NA other upstream 449822 18594053 ~ 18642884 (-)
G1671584 NA other upstream 487276 18631507 ~ 18632087 (-)

Expression


Co-expression Network