G1671491


Basic Information

Item Value
gene id G1671491
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18142227 ~ 18148406 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912392
gtaacgttacggttcttgaaataaatccctctaggttcatatcacgtcaaaataatttcactaatgcaaaaaaaatacacacctactgtacacggtcttaaccggttaacacagaacagtatttttcagtaacaacacgtttgtggcgtctgtcttcacacagcaggcgtattcggagaaacagattgctaattagctcaggtagtccactctgtcttccgtaaataagcgctgtgagatggaaatatggtcgtgtgggaaccccagccctataaagctgtgtatcaatttaaattttagttttttgaaaatgggttatcacggatatgaaagataaggtcattacgcctccaaaaacatatcgctagctaagcttgtatgtctaatgtaacgttatctcatgatgacaaagtcaagcgttagctaacagctagcctagctcaaatttcggttattaaactaacgttacctagctaccgattagtggtgaactacacacaaaaacaaacatctttaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912392 True 519 lncRNA 0.39 2 18142227 18148406

Neighbor

gene id symbol gene type direction distance location
LOC110498760 stub1 coding downstream 689506 17442590 ~ 17452727 (-)
LOC110498759 NA coding downstream 711171 17428615 ~ 17434040 (-)
LOC110499078 LOC106578245 coding downstream 767912 17367169 ~ 17374315 (-)
LOC118942007 LOC106578245 coding downstream 779629 17359654 ~ 17362598 (-)
LOC118942041 LOC106611593 coding downstream 791767 17346166 ~ 17350460 (-)
LOC110512504 NA coding upstream 225369 18373775 ~ 18381647 (-)
LOC118942047 NA coding upstream 235459 18383865 ~ 18384458 (-)
LOC110498770 LOC106589258 coding upstream 605688 18754094 ~ 18887492 (-)
LOC110499157 LOC106589261 coding upstream 741664 18890070 ~ 19003867 (-)
LOC110499154 LOC106589262 coding upstream 905720 19054126 ~ 19095333 (-)
G1671489 NA non-coding downstream 4708 18118813 ~ 18137519 (-)
G1671505 NA non-coding downstream 13284 18122259 ~ 18128943 (-)
G1671504 NA non-coding downstream 20669 18115654 ~ 18121558 (-)
G1671499 NA non-coding downstream 38370 18095514 ~ 18103857 (-)
G1671498 NA non-coding downstream 39143 18094686 ~ 18103084 (-)
G1671526 NA non-coding upstream 66830 18215236 ~ 18221419 (-)
G1671531 NA non-coding upstream 172701 18321107 ~ 18324604 (-)
G1671538 NA non-coding upstream 183582 18331988 ~ 18332237 (-)
G1671540 NA non-coding upstream 198925 18347331 ~ 18350834 (-)
G1671541 NA non-coding upstream 202465 18350871 ~ 18369173 (-)
G1671478 NA other downstream 109385 18022444 ~ 18032842 (-)
G1670142 NA other downstream 447643 17687735 ~ 17694584 (-)
G1670145 NA other downstream 450361 17685976 ~ 17691866 (-)
G1670109 LOC105007702 other downstream 516779 17596615 ~ 17625448 (-)
G1671549 NA other upstream 251946 18400352 ~ 18406596 (-)
G1671550 NA other upstream 260718 18409124 ~ 18415464 (-)
G1671578 NA other upstream 417464 18565870 ~ 18624587 (-)
G1671580 NA other upstream 445647 18594053 ~ 18642884 (-)
G1671584 NA other upstream 483101 18631507 ~ 18632087 (-)

Expression


Co-expression Network