G1671531



Basic Information


Item Value
gene id G1671531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18321107 ~ 18324604 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1912473
gtaaatcggtcagttcttaacataaacacttaaaactcaggattctgtaaaggcataccccaatgaggatatgtgtttacctatagcttcctgtgccaaccggaagtgccataattggtgtcacaggggatgtttcaaagggttaaaaagtcagatctttccaaaacttcatgtgtgtgattaggcaacccccatgaactgtaaatgtcatttttcccataaaatttcaaagaaaaactaaatcacacacaagcacagcttggaaggagggacacattggggtgcgtagagacatacactgagatatacattagttagctttgttcgagctaaaaaagaaccgtcagaactag

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1912473 True 353 lncRNA 0.40 2 18321107 18324604

Neighbor


gene id symbol gene type direction distance location
LOC110498760 stub1 coding downstream 868386 17442590 ~ 17452727 (-)
LOC110498759 NA coding downstream 890051 17428615 ~ 17434040 (-)
LOC110499078 LOC106578245 coding downstream 946792 17367169 ~ 17374315 (-)
LOC118942007 LOC106578245 coding downstream 958509 17359654 ~ 17362598 (-)
LOC118942041 LOC106611593 coding downstream 970647 17346166 ~ 17350460 (-)
LOC110512504 NA coding upstream 49171 18373775 ~ 18381647 (-)
LOC118942047 NA coding upstream 59261 18383865 ~ 18384458 (-)
LOC110498770 LOC106589258 coding upstream 429490 18754094 ~ 18887492 (-)
LOC110499157 LOC106589261 coding upstream 565466 18890070 ~ 19003867 (-)
LOC110499154 LOC106589262 coding upstream 729522 19054126 ~ 19095333 (-)
G1671526 NA non-coding downstream 99688 18215236 ~ 18221419 (-)
G1671508 NA non-coding downstream 110944 18135336 ~ 18210163 (-)
G1671507 NA non-coding downstream 161480 18127501 ~ 18159627 (-)
G1671491 NA non-coding downstream 172701 18142227 ~ 18148406 (-)
G1671511 NA non-coding downstream 176876 18138186 ~ 18144231 (-)
G1671538 NA non-coding upstream 7384 18331988 ~ 18332237 (-)
G1671540 NA non-coding upstream 22727 18347331 ~ 18350834 (-)
G1671541 NA non-coding upstream 26267 18350871 ~ 18369173 (-)
G1671546 NA non-coding upstream 60850 18385454 ~ 18387516 (-)
G1671478 NA other downstream 288265 18022444 ~ 18032842 (-)
G1670142 NA other downstream 626523 17687735 ~ 17694584 (-)
G1670145 NA other downstream 629241 17685976 ~ 17691866 (-)
G1670109 LOC105007702 other downstream 695659 17596615 ~ 17625448 (-)
G1671549 NA other upstream 75748 18400352 ~ 18406596 (-)
G1671550 NA other upstream 84520 18409124 ~ 18415464 (-)
G1671578 NA other upstream 241266 18565870 ~ 18624587 (-)
G1671580 NA other upstream 269449 18594053 ~ 18642884 (-)
G1671584 NA other upstream 306903 18631507 ~ 18632087 (-)

Expression



Co-expression Network